Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011750 | Potato | nucleus | 92.31 | 93.91 |
| Solyc12g099120.1.1 | Tomato | nucleus | 89.32 | 84.62 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 40.17 | 73.44 |
| CDX85422 | Canola | nucleus | 52.99 | 67.76 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 50.43 | 64.84 |
| CDX86220 | Canola | nucleus | 52.99 | 64.25 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 41.45 | 55.43 |
| PGSC0003DMT400022600 | Potato | nucleus | 65.81 | 51.85 |
| GSMUA_Achr11P... | Banana | nucleus | 56.41 | 50.38 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 64.96 | 49.67 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 54.27 | 49.61 |
| AT1G48000.1 | Thale cress | nucleus | 50.85 | 48.97 |
| GSMUA_Achr11P... | Banana | nucleus | 55.13 | 48.86 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 54.27 | 48.85 |
| Bra001202.1-P | Field mustard | nucleus | 62.82 | 48.36 |
| PGSC0003DMT400011748 | Potato | nucleus | 60.68 | 48.14 |
| CDY33891 | Canola | nucleus | 65.38 | 48.11 |
| CDY05611 | Canola | nucleus | 65.38 | 48.11 |
| Bra020624.1-P | Field mustard | nucleus | 65.38 | 48.11 |
| CDY24688 | Canola | nucleus | 63.68 | 46.71 |
| CDY05270 | Canola | nucleus | 64.1 | 46.58 |
| PGSC0003DMT400072687 | Potato | nucleus | 26.92 | 46.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.56 | 46.07 |
| KRH02414 | Soybean | nucleus | 63.25 | 45.96 |
| CDY34949 | Canola | nucleus | 62.82 | 45.94 |
| CDX99864 | Canola | nucleus | 62.82 | 45.94 |
| Bra040274.1-P | Field mustard | nucleus | 62.82 | 45.94 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 52.99 | 45.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.13 | 45.91 |
| PGSC0003DMT400001278 | Potato | nucleus | 40.6 | 45.89 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 52.56 | 45.72 |
| Bra029582.1-P | Field mustard | nucleus | 62.82 | 45.65 |
| Bra010022.1-P | Field mustard | nucleus | 62.82 | 45.51 |
| Bra010021.1-P | Field mustard | nucleus | 62.82 | 45.51 |
| KRH50671 | Soybean | nucleus | 62.39 | 44.92 |
| PGSC0003DMT400069841 | Potato | nucleus | 60.68 | 43.83 |
| KRH36928 | Soybean | nucleus | 62.39 | 42.94 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 50.43 | 42.45 |
| KRG97314 | Soybean | nucleus | 61.54 | 42.23 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 52.14 | 42.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.57 | 42.18 |
| CDY70282 | Canola | nucleus | 52.99 | 42.18 |
| TraesCSU01G069000.1 | Wheat | nucleus | 52.14 | 42.07 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 52.56 | 41.98 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 52.56 | 41.98 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 49.57 | 41.73 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 49.57 | 41.73 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 50.0 | 41.49 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 54.27 | 39.94 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 54.27 | 39.81 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 54.27 | 39.81 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 46.15 | 39.71 |
| PGSC0003DMT400037716 | Potato | nucleus | 45.73 | 39.19 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 48.72 | 38.91 |
| EES00624 | Sorghum | nucleus | 50.43 | 38.56 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 45.3 | 38.13 |
| Zm00001d040594_P001 | Maize | nucleus | 49.15 | 37.95 |
| GSMUA_Achr11P... | Banana | nucleus | 55.13 | 37.5 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 51.71 | 37.46 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 49.15 | 37.46 |
| PGSC0003DMT400014383 | Potato | nucleus | 44.44 | 37.41 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 51.71 | 37.35 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 49.15 | 37.34 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 51.71 | 37.23 |
| Zm00001d028930_P001 | Maize | nucleus | 53.42 | 37.2 |
| KXG39500 | Sorghum | nucleus | 53.42 | 37.2 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 51.71 | 37.12 |
| Zm00001d009066_P001 | Maize | nucleus | 48.72 | 35.85 |
| CDX74100 | Canola | nucleus | 51.28 | 35.61 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 49.57 | 35.58 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 43.59 | 35.54 |
| PGSC0003DMT400069955 | Potato | nucleus | 34.62 | 35.37 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 49.57 | 35.37 |
| Zm00001d047579_P001 | Maize | nucleus | 52.56 | 35.24 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 49.57 | 34.94 |
| KXG36991 | Sorghum | nucleus | 50.43 | 34.5 |
| EES17207 | Sorghum | nucleus | 49.57 | 34.42 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 53.85 | 34.15 |
| Zm00001d048647_P001 | Maize | nucleus | 50.85 | 33.81 |
| Zm00001d007191_P001 | Maize | nucleus | 50.0 | 33.72 |
| Zm00001d030644_P001 | Maize | nucleus | 50.0 | 33.33 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 46.58 | 32.93 |
| Zm00001d024726_P001 | Maize | nucleus | 48.72 | 32.11 |
| PGSC0003DMT400040149 | Potato | nucleus | 29.91 | 32.11 |
| EES10257 | Sorghum | nucleus | 50.0 | 32.05 |
| Zm00001d010933_P001 | Maize | nucleus | 50.0 | 31.88 |
| PGSC0003DMT400003479 | Potato | nucleus | 32.05 | 31.51 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 48.29 | 31.13 |
| PGSC0003DMT400003796 | Potato | nucleus | 33.33 | 30.83 |
| Os05t0132700-01 | Rice | nucleus | 27.35 | 29.77 |
| KXG21220 | Sorghum | nucleus | 50.43 | 29.06 |
| Zm00001d024725_P001 | Maize | nucleus | 50.0 | 28.82 |
| KXG21221 | Sorghum | nucleus | 50.0 | 24.53 |
| CDY58600 | Canola | nucleus | 26.92 | 19.5 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1A031 | InterPro:Myb_dom | PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG401004611 |
| PGSC:PGSC0003DMG401004611 | EnsemblPlants:PGSC0003DMT400011745 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF494 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295FBE0 | SEG:seg | : | : |
Description
ABA-induced MYB transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG401004611]
Coordinates
chr12:+:59911547..59912674
Molecular Weight (calculated)
27772.4 Da
IEP (calculated)
7.113
GRAVY (calculated)
-0.908
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MELRRGPWSV EEDFVLMNYI SHHGEGRWNS LSRCAGLKRT GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL QLHSRWGNRW SKIAQHLPGR TDNEIKNYWR
101: TRVQKHAKQL KCDVNSKQFQ DTLRYLWIPR LVERIQASKI SNNNSSSETQ QPVQLMNNNN NSILITSVTP ENSSVATSSE NSNQDYYQVN QSDQLWFEDY
201: QAMDQQNNIE LWMDNEDIFN NLCNNEDIWS LLEH
101: TRVQKHAKQL KCDVNSKQFQ DTLRYLWIPR LVERIQASKI SNNNSSSETQ QPVQLMNNNN NSILITSVTP ENSSVATSSE NSNQDYYQVN QSDQLWFEDY
201: QAMDQQNNIE LWMDNEDIFN NLCNNEDIWS LLEH
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.