Factsheet for GSMUA_Achr8P10800_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P19990_001	Banana	nucleus	39.06	78.12
GSMUA_Achr5P21090_001	Banana	nucleus	53.91	75.82
GSMUA_Achr3P01370_001	Banana	nucleus	34.77	71.77
CDX85422	Canola	nucleus	49.22	68.85
GSMUA_Achr9P16640_001	Banana	nucleus	67.19	66.15
GSMUA_Achr11P...	Banana	nucleus	67.58	66.03
CDX86220	Canola	nucleus	49.22	65.28
GSMUA_AchrUn_...	Banana	nucleus	68.36	62.28
GSMUA_Achr11P...	Banana	nucleus	60.94	59.09
GSMUA_Achr3P12730_001	Banana	nucleus	39.45	57.71
PGSC0003DMT400011745	Potato	nucleus	49.61	54.27
PGSC0003DMT400011750	Potato	nucleus	48.44	53.91
GSMUA_Achr10P...	Banana	nucleus	36.72	53.71
Solyc12g099130.1.1	Tomato	nucleus	49.22	53.62
GSMUA_Achr8P29910_001	Banana	nucleus	56.25	53.53
GSMUA_AchrUn_...	Banana	nucleus	55.08	52.81
Solyc12g099120.1.1	Tomato	nucleus	50.39	52.23
GSMUA_Achr1P24960_001	Banana	nucleus	54.3	51.48
GSMUA_Achr1P21020_001	Banana	nucleus	38.28	50.26
GSMUA_Achr6P27290_001	Banana	nucleus	37.5	49.23
GSMUA_Achr11P...	Banana	nucleus	64.84	48.26
Solyc01g057910.2.1	Tomato	nucleus	53.91	48.08
VIT_05s0077g00500.t01	Wine grape	nucleus	57.03	47.71
GSMUA_Achr1P27270_001	Banana	nucleus	36.33	47.45
AT1G48000.1	Thale cress	nucleus	44.92	47.33
PGSC0003DMT400022600	Potato	nucleus	54.3	46.8
GSMUA_AchrUn_...	Banana	nucleus	49.61	46.18
Bra001202.1-P	Field mustard	nucleus	54.69	46.05
PGSC0003DMT400011748	Potato	nucleus	51.17	44.41
AT5G49620.2	Thale cress	nucleus	55.08	43.93
CDY24688	Canola	nucleus	54.69	43.89
CDY34949	Canola	nucleus	54.69	43.75
CDX99864	Canola	nucleus	54.69	43.75
Bra040274.1-P	Field mustard	nucleus	54.69	43.75
CDY33891	Canola	nucleus	54.3	43.71
CDY05611	Canola	nucleus	54.3	43.71
Bra020624.1-P	Field mustard	nucleus	54.3	43.71
KRH02414	Soybean	nucleus	54.69	43.48
KRH50671	Soybean	nucleus	55.08	43.38
KRH36928	Soybean	nucleus	57.42	43.24
CDY05270	Canola	nucleus	54.3	43.17
Bra029582.1-P	Field mustard	nucleus	54.3	43.17
AT3G06490.1	Thale cress	nucleus	54.3	43.03
GSMUA_Achr7P05570_001	Banana	nucleus	45.7	43.01
Solyc05g053330.2.1	Tomato	nucleus	53.12	42.77
Solyc12g099140.1.1	Tomato	nucleus	50.0	42.67
KRG97314	Soybean	nucleus	56.64	42.52
GSMUA_Achr3P08370_001	Banana	nucleus	47.27	42.16
Bra010021.1-P	Field mustard	nucleus	53.12	42.11
Bra010022.1-P	Field mustard	nucleus	53.12	42.11
GSMUA_Achr8P18460_001	Banana	nucleus	40.62	41.77
PGSC0003DMT400069841	Potato	nucleus	52.34	41.36
CDY70282	Canola	nucleus	45.7	39.8
GSMUA_Achr11P...	Banana	nucleus	32.81	39.44
GSMUA_Achr2P22640_001	Banana	nucleus	44.14	38.7
GSMUA_Achr10P...	Banana	nucleus	32.03	38.68
GSMUA_Achr3P21060_001	Banana	nucleus	44.92	37.95
GSMUA_Achr4P29230_001	Banana	nucleus	30.08	37.75
GSMUA_Achr6P09760_001	Banana	nucleus	44.53	37.01
GSMUA_Achr9P28370_001	Banana	nucleus	30.86	36.92
GSMUA_Achr2P16200_001	Banana	nucleus	28.91	36.1
GSMUA_Achr6P15370_001	Banana	nucleus	29.3	35.89
GSMUA_Achr8P12710_001	Banana	nucleus	32.03	35.5
GSMUA_Achr11P...	Banana	nucleus	43.36	35.24
GSMUA_Achr11P...	Banana	nucleus	31.25	34.78
GSMUA_Achr10P...	Banana	nucleus	30.47	34.51
GSMUA_Achr5P28350_001	Banana	nucleus	31.25	33.76
GSMUA_Achr10P...	Banana	nucleus	30.86	33.47
GSMUA_Achr8P02640_001	Banana	nucleus	30.86	33.47
GSMUA_Achr1P03450_001	Banana	nucleus	31.64	33.33
CDX74100	Canola	nucleus	43.36	32.94
GSMUA_Achr11P...	Banana	nucleus	30.86	32.78
GSMUA_Achr7P18200_001	Banana	nucleus	28.91	30.71
GSMUA_Achr8P34340_001	Banana	nucleus	28.91	30.2
CDY58600	Canola	nucleus	27.34	21.67
GSMUA_Achr9P07000_001	Banana	nucleus	43.36	8.83

Protein Annotations

EnsemblPlants:GSMUA_Achr8P10800_001	EnsemblPlants:GSMUA_Achr8T10800_001	EnsemblPlantsGene:GSMUA_Achr8G10800_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF743	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000294D9BF	UniProt:M0TPD3	MapMan:15.5.2.1	:	:

Description

Myb-related protein 305 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10800_001]

Coordinates

chr8:-:7738326..7739275

Molecular Weight (calculated)

28966.0 Da

IEP (calculated)

5.708

GRAVY (calculated)

-0.595

Length

256 amino acids

Sequence
(BLAST)

001: MEFHGRTCGS FMAQSEEEVD LRRGPWTAEE DLVLMNYVAA HGEGRWNSLA RCSGLRRTGK SCRLRWLNYL RPDVRRGNIT PEEQLLILQL HTRWGNRWSK
101: IAQYLPGRTD NEIKNYWRTR VQKHAKQLRC DVNSKQFKDA MTYVWMPRLV ERIRAASGVS TTAPAGPVAE VELVMKPSPE ESSTPSSSFG AEFPPAPPVF
201: DTFPAAAAAA TQSGEGELPG WWSESGDTDL GLPDFDHSVW GDDLWSAEDI WLQQQL

Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)

001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF

Arabidopsis Description

AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.