Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P19990_001 | Banana | nucleus | 37.41 | 78.91 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 32.59 | 70.97 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 45.93 | 68.13 |
| CDX85422 | Canola | nucleus | 44.81 | 66.12 |
| CDX86220 | Canola | nucleus | 44.81 | 62.69 |
| GSMUA_Achr11P... | Banana | nucleus | 57.78 | 59.09 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 37.41 | 57.71 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 51.48 | 54.3 |
| GSMUA_Achr10P... | Banana | nucleus | 35.19 | 54.29 |
| GSMUA_Achr11P... | Banana | nucleus | 52.22 | 53.82 |
| PGSC0003DMT400011750 | Potato | nucleus | 45.19 | 53.04 |
| PGSC0003DMT400011745 | Potato | nucleus | 45.93 | 52.99 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 50.74 | 52.69 |
| Solyc12g099130.1.1 | Tomato | nucleus | 44.81 | 51.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.74 | 51.31 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 51.11 | 51.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.96 | 50.89 |
| Solyc12g099120.1.1 | Tomato | nucleus | 46.3 | 50.61 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 35.93 | 49.74 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 56.3 | 49.67 |
| Solyc01g057910.2.1 | Tomato | nucleus | 52.59 | 49.48 |
| AT1G48000.1 | Thale cress | nucleus | 44.07 | 48.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.63 | 48.73 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 35.19 | 48.72 |
| PGSC0003DMT400022600 | Potato | nucleus | 53.33 | 48.48 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 34.81 | 47.96 |
| Os03t0315400-01 | Rice | nucleus | 55.93 | 45.9 |
| Bra001202.1-P | Field mustard | nucleus | 51.48 | 45.72 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 53.7 | 45.45 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 53.7 | 45.45 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 53.33 | 45.28 |
| PGSC0003DMT400011748 | Potato | nucleus | 48.89 | 44.75 |
| KXG39500 | Sorghum | nucleus | 55.56 | 44.64 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 44.44 | 44.12 |
| KRH02414 | Soybean | nucleus | 52.59 | 44.1 |
| AT5G49620.2 | Thale cress | nucleus | 51.48 | 43.3 |
| CDY24688 | Canola | nucleus | 51.11 | 43.26 |
| Zm00001d028930_P001 | Maize | nucleus | 53.7 | 43.15 |
| CDY33891 | Canola | nucleus | 50.74 | 43.08 |
| CDY05611 | Canola | nucleus | 50.74 | 43.08 |
| Solyc05g053330.2.1 | Tomato | nucleus | 50.74 | 43.08 |
| Bra020624.1-P | Field mustard | nucleus | 50.74 | 43.08 |
| KRH50671 | Soybean | nucleus | 51.85 | 43.08 |
| CDX99864 | Canola | nucleus | 50.74 | 42.81 |
| Bra040274.1-P | Field mustard | nucleus | 50.74 | 42.81 |
| CDY34949 | Canola | nucleus | 50.74 | 42.81 |
| PGSC0003DMT400069841 | Potato | nucleus | 51.11 | 42.59 |
| Bra029582.1-P | Field mustard | nucleus | 50.74 | 42.55 |
| CDY05270 | Canola | nucleus | 50.74 | 42.55 |
| Bra010021.1-P | Field mustard | nucleus | 50.74 | 42.41 |
| Bra010022.1-P | Field mustard | nucleus | 50.74 | 42.41 |
| Solyc12g099140.1.1 | Tomato | nucleus | 47.04 | 42.33 |
| Zm00001d047579_P001 | Maize | nucleus | 54.44 | 42.12 |
| KRH36928 | Soybean | nucleus | 52.96 | 42.06 |
| AT3G06490.1 | Thale cress | nucleus | 50.0 | 41.8 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 38.52 | 41.77 |
| KRG97314 | Soybean | nucleus | 52.59 | 41.64 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 42.96 | 40.42 |
| CDY70282 | Canola | nucleus | 43.33 | 39.8 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 53.7 | 39.3 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 31.11 | 39.25 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 29.63 | 39.02 |
| GSMUA_Achr11P... | Banana | nucleus | 49.63 | 38.95 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 41.85 | 38.7 |
| GSMUA_Achr10P... | Banana | nucleus | 30.0 | 38.21 |
| GSMUA_Achr10P... | Banana | nucleus | 31.85 | 38.05 |
| GSMUA_Achr11P... | Banana | nucleus | 30.0 | 38.03 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 29.26 | 37.8 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 42.96 | 37.66 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 41.48 | 36.96 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 27.78 | 36.76 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 31.85 | 36.29 |
| GSMUA_Achr11P... | Banana | nucleus | 41.85 | 35.87 |
| GSMUA_Achr10P... | Banana | nucleus | 31.11 | 35.59 |
| GSMUA_Achr11P... | Banana | nucleus | 31.11 | 34.85 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 30.37 | 34.75 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 29.26 | 34.2 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 30.37 | 33.47 |
| CDX74100 | Canola | nucleus | 41.11 | 32.94 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 29.63 | 32.92 |
| GSMUA_Achr11P... | Banana | nucleus | 27.78 | 32.61 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 27.78 | 31.12 |
| CDY58600 | Canola | nucleus | 24.44 | 20.43 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 43.33 | 9.31 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0045893 | GO:GO:1901002 | GO:GO:1902584 | EnsemblPlantsGene:GSMUA_Achr1G24960_001 | EnsemblPlants:GSMUA_Achr1P24960_001 | EnsemblPlants:GSMUA_Achr1T24960_001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0S2V3 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295089C |
Description
Putative Transcription factor MYB21 [Source:GMGC_GENE;Acc:GSMUA_Achr1G24960_001]
Coordinates
chr1:-:19356384..19357437
Molecular Weight (calculated)
31072.0 Da
IEP (calculated)
5.471
GRAVY (calculated)
-0.844
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFNGRARGE DEVELRKGSW TVEEDLLLVN YVAEHGEGRW DSLAREAGLK RTGKSCRLRW LNYLRPDLRR GNITPEEQLL ILELHSRWGN RWSKIAQHMP
101: GRTDNEIKNY WRTRVQKHAK QLRCDVDSKR FKDVVRHLWM PRLLERIRAA SGSSAVSTHQ SVNDPSTCKR PEEGDVELGE AKSASPESSN IVRSSSEASE
201: VQVSTASVSD RFTNCDDAWF QETTGFGAYW PETLPSPGAC DSWGWSMDLD QSGWEENLWS MEDTWLQQQI
101: GRTDNEIKNY WRTRVQKHAK QLRCDVDSKR FKDVVRHLWM PRLLERIRAA SGSSAVSTHQ SVNDPSTCKR PEEGDVELGE AKSASPESSN IVRSSSEASE
201: VQVSTASVSD RFTNCDDAWF QETTGFGAYW PETLPSPGAC DSWGWSMDLD QSGWEENLWS MEDTWLQQQI
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.