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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P21090_001 Banana nucleus 58.02 83.52
GSMUA_Achr4P19990_001 Banana nucleus 37.79 77.34
GSMUA_Achr3P01370_001 Banana nucleus 35.5 75.0
CDX85422 Canola nucleus 48.85 69.95
GSMUA_AchrUn_... Banana nucleus 74.05 69.04
GSMUA_Achr9P16640_001 Banana nucleus 67.18 67.69
GSMUA_Achr8P10800_001 Banana nucleus 66.03 67.58
CDX86220 Canola nucleus 48.85 66.32
GSMUA_Achr3P12730_001 Banana nucleus 39.69 59.43
GSMUA_Achr11P... Banana nucleus 58.02 57.58
GSMUA_Achr8P29910_001 Banana nucleus 58.02 56.51
PGSC0003DMT400011745 Potato nucleus 50.38 56.41
PGSC0003DMT400011750 Potato nucleus 49.24 56.09
GSMUA_Achr10P... Banana nucleus 37.4 56.0
GSMUA_AchrUn_... Banana nucleus 56.87 55.81
Solyc12g099130.1.1 Tomato nucleus 49.62 55.32
Solyc12g099120.1.1 Tomato nucleus 50.76 53.85
GSMUA_Achr6P27290_001 Banana nucleus 38.93 52.31
GSMUA_Achr1P21020_001 Banana nucleus 38.93 52.31
GSMUA_Achr1P24960_001 Banana nucleus 53.82 52.22
AT1G48000.1 Thale cress nucleus 47.33 51.03
VIT_05s0077g00500.t01 Wine grape nucleus 58.78 50.33
GSMUA_Achr11P... Banana nucleus 65.65 50.0
Solyc01g057910.2.1 Tomato nucleus 54.58 49.83
PGSC0003DMT400022600 Potato nucleus 54.96 48.48
GSMUA_Achr1P27270_001 Banana nucleus 36.26 48.47
GSMUA_AchrUn_... Banana nucleus 49.62 47.27
Bra001202.1-P Field mustard nucleus 53.82 46.38
Solyc05g053330.2.1 Tomato nucleus 55.73 45.91
KRH02414 Soybean nucleus 55.73 45.34
AT5G49620.2 Thale cress nucleus 55.34 45.17
PGSC0003DMT400011748 Potato nucleus 50.76 45.08
GSMUA_Achr7P05570_001 Banana nucleus 46.56 44.85
KRH50671 Soybean nucleus 55.34 44.62
CDY24688 Canola nucleus 54.2 44.51
PGSC0003DMT400069841 Potato nucleus 54.96 44.44
Bra029582.1-P Field mustard nucleus 54.58 44.41
Bra020624.1-P Field mustard nucleus 53.82 44.34
CDY05611 Canola nucleus 53.82 44.34
CDY33891 Canola nucleus 53.82 44.34
KRH36928 Soybean nucleus 57.25 44.12
Bra040274.1-P Field mustard nucleus 53.82 44.06
CDY34949 Canola nucleus 53.82 44.06
CDX99864 Canola nucleus 53.82 44.06
CDY05270 Canola nucleus 53.82 43.79
Solyc12g099140.1.1 Tomato nucleus 50.0 43.67
AT3G06490.1 Thale cress nucleus 53.82 43.65
Bra010022.1-P Field mustard nucleus 53.82 43.65
Bra010021.1-P Field mustard nucleus 53.82 43.65
KRG97314 Soybean nucleus 56.49 43.4
GSMUA_Achr8P18460_001 Banana nucleus 41.22 43.37
GSMUA_Achr3P08370_001 Banana nucleus 46.56 42.51
CDY70282 Canola nucleus 44.66 39.8
GSMUA_Achr4P29230_001 Banana nucleus 30.53 39.22
GSMUA_Achr10P... Banana nucleus 31.3 38.68
GSMUA_Achr2P22640_001 Banana nucleus 42.75 38.36
GSMUA_Achr3P21060_001 Banana nucleus 43.89 37.95
GSMUA_Achr2P16200_001 Banana nucleus 29.39 37.56
GSMUA_Achr11P... Banana nucleus 30.53 37.56
GSMUA_Achr9P28370_001 Banana nucleus 30.53 37.38
GSMUA_Achr11P... Banana nucleus 44.66 37.14
GSMUA_Achr6P09760_001 Banana nucleus 43.51 37.01
GSMUA_Achr10P... Banana nucleus 29.77 34.51
GSMUA_Achr6P15370_001 Banana nucleus 27.48 34.45
GSMUA_Achr8P12710_001 Banana nucleus 30.15 34.2
GSMUA_Achr11P... Banana nucleus 29.77 33.91
GSMUA_Achr8P02640_001 Banana nucleus 30.15 33.47
GSMUA_Achr1P03450_001 Banana nucleus 30.92 33.33
CDX74100 Canola nucleus 42.37 32.94
GSMUA_Achr5P28350_001 Banana nucleus 29.77 32.91
GSMUA_Achr10P... Banana nucleus 29.39 32.63
GSMUA_Achr11P... Banana nucleus 29.77 32.37
GSMUA_Achr7P18200_001 Banana nucleus 27.48 29.88
GSMUA_Achr8P34340_001 Banana nucleus 27.86 29.8
CDY58600 Canola nucleus 26.72 21.67
GSMUA_Achr9P07000_001 Banana nucleus 43.89 9.15
Protein Annotations
EnsemblPlants:GSMUA_Achr11P16130_001EnsemblPlants:GSMUA_Achr11T16130_001EnsemblPlantsGene:GSMUA_Achr11G16130_001Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/Myb
PANTHER:PTHR10641PANTHER:PTHR10641:SF743PFAM:PF00249PFscan:PS51294SMART:SM00717SUPFAM:SSF46689
UniParc:UPI000294873AUniProt:M0RSP3MapMan:15.5.2.1:::
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G16130_001]
Coordinates
chr11:-:17834970..17835913
Molecular Weight (calculated)
29706.0 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.576
Length
262 amino acids
Sequence
(BLAST)
001: MEFHGSITPQ SVEEMDLRRG PWTVEEDLLL MNYIAAHGEG RWNSLARCAG LRRTGKSCRL RWLNYLRPDV RRGNITPEEQ LLILELHSRW GNRWSKIAQF
101: LPGRTDNEIK NYWRTRVQKH AKQLKCDVNS KQFKDVMRYL WMPRLIERIR VASGDPTAVE PAAHWTPELA PVNPSPDNSS TAGSPSLQFS PQPVPDICAD
201: CSTRQGDGNG GDVIQPGEFA ASWSASALSP GGDAHLGLLD FDQIQWGDSL WTVEDIWLQQ QF
Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.