Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24688 | Canola | nucleus | 97.52 | 98.43 |
| Bra029582.1-P | Field mustard | nucleus | 97.83 | 97.83 |
| AT3G06490.1 | Thale cress | nucleus | 88.82 | 88.54 |
| CDX99864 | Canola | nucleus | 86.02 | 86.56 |
| CDY34949 | Canola | nucleus | 86.02 | 86.56 |
| CDX85422 | Canola | nucleus | 45.34 | 79.78 |
| CDX86220 | Canola | nucleus | 45.34 | 75.65 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 29.5 | 74.22 |
| CDY70282 | Canola | nucleus | 66.46 | 72.79 |
| CDY05611 | Canola | nucleus | 67.39 | 68.24 |
| CDY33891 | Canola | nucleus | 67.39 | 68.24 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 38.51 | 68.13 |
| PGSC0003DMT400011745 | Potato | nucleus | 46.58 | 64.1 |
| PGSC0003DMT400011750 | Potato | nucleus | 45.03 | 63.04 |
| Solyc12g099130.1.1 | Tomato | nucleus | 44.72 | 61.28 |
| CDX74100 | Canola | nucleus | 63.98 | 61.13 |
| Solyc12g099120.1.1 | Tomato | nucleus | 46.58 | 60.73 |
| PGSC0003DMT400022600 | Potato | nucleus | 54.04 | 58.59 |
| CDX86221 | Canola | nucleus | 12.73 | 58.57 |
| Solyc01g057910.2.1 | Tomato | nucleus | 52.17 | 58.54 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 54.66 | 57.52 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 30.12 | 55.43 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 43.17 | 54.3 |
| GSMUA_Achr11P... | Banana | nucleus | 43.79 | 53.82 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 43.17 | 53.46 |
| GSMUA_Achr11P... | Banana | nucleus | 43.79 | 53.41 |
| CDY58599 | Canola | nucleus | 17.39 | 52.83 |
| PGSC0003DMT400011748 | Potato | nucleus | 46.89 | 51.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.41 | 50.89 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 42.55 | 50.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.93 | 50.56 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 41.93 | 50.19 |
| Solyc12g099140.1.1 | Tomato | nucleus | 46.58 | 50.0 |
| Solyc05g053330.2.1 | Tomato | nucleus | 48.14 | 48.74 |
| CDX95420 | Canola | nucleus | 35.09 | 48.71 |
| PGSC0003DMT400069841 | Potato | nucleus | 48.14 | 47.84 |
| CDY37512 | Canola | nucleus | 29.81 | 47.76 |
| CDY49063 | Canola | nucleus | 30.43 | 47.34 |
| CDX91944 | Canola | nucleus | 29.81 | 46.38 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 45.34 | 45.77 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 45.34 | 45.77 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 45.03 | 45.6 |
| TraesCSU01G069000.1 | Wheat | nucleus | 40.99 | 45.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.82 | 45.45 |
| CDY27504 | Canola | nucleus | 38.2 | 45.22 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 40.99 | 45.05 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 40.37 | 44.98 |
| CDX74303 | Canola | nucleus | 28.88 | 44.71 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 40.68 | 44.71 |
| CDY00146 | Canola | nucleus | 22.98 | 44.58 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 40.06 | 44.03 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 37.89 | 43.88 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 37.89 | 43.88 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 37.89 | 43.88 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 37.89 | 43.26 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 36.34 | 43.01 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 42.55 | 42.41 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 42.55 | 42.28 |
| KXG39500 | Sorghum | nucleus | 44.1 | 42.26 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 36.34 | 42.09 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 40.06 | 42.02 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 42.24 | 41.85 |
| EES00624 | Sorghum | nucleus | 39.75 | 41.83 |
| CDY20036 | Canola | nucleus | 30.12 | 41.81 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 39.75 | 41.56 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 41.93 | 41.41 |
| CDY44433 | Canola | nucleus | 29.81 | 41.38 |
| Zm00001d028930_P001 | Maize | nucleus | 43.17 | 41.37 |
| CDX80085 | Canola | nucleus | 25.47 | 41.21 |
| CDX86471 | Canola | nucleus | 29.5 | 40.95 |
| Zm00001d040594_P001 | Maize | nucleus | 37.89 | 40.26 |
| GSMUA_Achr11P... | Banana | nucleus | 42.86 | 40.12 |
| Zm00001d047579_P001 | Maize | nucleus | 43.48 | 40.11 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 35.4 | 39.72 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 44.72 | 39.02 |
| CDY69488 | Canola | nucleus | 33.54 | 38.99 |
| CDY01906 | Canola | nucleus | 34.47 | 38.95 |
| KXG36991 | Sorghum | nucleus | 41.3 | 38.89 |
| CDX96033 | Canola | nucleus | 34.16 | 38.73 |
| CDY69953 | Canola | nucleus | 33.54 | 38.3 |
| Zm00001d007191_P001 | Maize | nucleus | 40.68 | 37.75 |
| CDY42115 | Canola | nucleus | 32.3 | 37.55 |
| CDX84981 | Canola | nucleus | 33.54 | 37.5 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 38.51 | 37.46 |
| Zm00001d009066_P001 | Maize | nucleus | 36.96 | 37.42 |
| CDY03859 | Canola | nucleus | 33.23 | 37.28 |
| CDY12705 | Canola | nucleus | 32.61 | 36.84 |
| CDY54094 | Canola | nucleus | 32.3 | 36.49 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 36.34 | 35.89 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 36.34 | 35.67 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 36.65 | 35.54 |
| Zm00001d048647_P001 | Maize | nucleus | 38.82 | 35.51 |
| Zm00001d010933_P001 | Maize | nucleus | 39.75 | 34.88 |
| EES17207 | Sorghum | nucleus | 36.34 | 34.72 |
| Zm00001d030644_P001 | Maize | nucleus | 37.27 | 34.19 |
| EES10257 | Sorghum | nucleus | 38.51 | 33.97 |
| CDY70097 | Canola | nucleus | 24.84 | 33.9 |
| CDX77436 | Canola | nucleus | 27.33 | 33.85 |
| CDY61190 | Canola | nucleus | 27.02 | 33.33 |
| CDX71075 | Canola | nucleus | 24.84 | 33.2 |
| CDX80230 | Canola | nucleus | 24.22 | 32.91 |
| CDY49581 | Canola | nucleus | 24.22 | 32.91 |
| Zm00001d024726_P001 | Maize | nucleus | 36.02 | 32.68 |
| CDX93006 | Canola | nucleus | 27.64 | 32.48 |
| CDY49231 | Canola | nucleus | 27.02 | 32.46 |
| CDX94829 | Canola | nucleus | 27.33 | 32.23 |
| CDY64694 | Canola | nucleus | 27.33 | 32.12 |
| Os05t0132700-01 | Rice | nucleus | 21.43 | 32.09 |
| CDX88722 | Canola | nucleus | 23.91 | 31.82 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 35.71 | 31.68 |
| CDX86354 | Canola | nucleus | 25.47 | 30.6 |
| KXG21220 | Sorghum | nucleus | 38.51 | 30.54 |
| Zm00001d024725_P001 | Maize | nucleus | 38.51 | 30.54 |
| CDY45895 | Canola | nucleus | 24.22 | 30.35 |
| CDX73572 | Canola | nucleus | 22.67 | 29.8 |
| CDX78153 | Canola | nucleus | 22.67 | 29.8 |
| CDX85285 | Canola | nucleus | 24.84 | 29.63 |
| CDY00083 | Canola | nucleus | 24.53 | 29.26 |
| CDY19978 | Canola | nucleus | 24.22 | 29.21 |
| CDX67561 | Canola | nucleus | 21.43 | 28.75 |
| CDX86041 | Canola | nucleus | 24.53 | 28.42 |
| CDX99125 | Canola | nucleus | 24.53 | 28.42 |
| CDY13311 | Canola | nucleus | 21.43 | 28.28 |
| CDX86040 | Canola | nucleus | 24.22 | 28.06 |
| KXG21221 | Sorghum | nucleus | 37.89 | 25.58 |
| CDY35782 | Canola | nucleus | 15.84 | 24.88 |
| CDY58600 | Canola | nucleus | 21.43 | 21.36 |
Protein Annotations
| EnsemblPlants:CDY05270 | EnsemblPlantsGene:GSBRNA2T00120095001 | Gene3D:1.10.10.60 | GO:A0A078ETD6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY05270 | ProteinID:CDY05270.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE54A3 | MapMan:15.5.2.1 | : |
Description
BnaC05g45330D
Coordinates
chrLK031960:+:749436..751660
Molecular Weight (calculated)
37128.8 Da
IEP (calculated)
4.511
GRAVY (calculated)
-0.843
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEKGRNLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATHG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASAAATV ATTTNTTTTT VSAATSSSNT TSNNQFMTYD YNNNSMGQQF
201: GVVNNDYITP ENSNVAVSPM SDLTEYYSAP NTYPEYYSGQ VGNSYYPDQD LVVPQILPDN YLDYSGLLDE DLAVMQEQSN LNWFEDINGA TSSSDSLWNI
301: GESDEDLWFL QDQEQFNNNG NF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASAAATV ATTTNTTTTT VSAATSSSNT TSNNQFMTYD YNNNSMGQQF
201: GVVNNDYITP ENSNVAVSPM SDLTEYYSAP NTYPEYYSGQ VGNSYYPDQD LVVPQILPDN YLDYSGLLDE DLAVMQEQSN LNWFEDINGA TSSSDSLWNI
301: GESDEDLWFL QDQEQFNNNG NF
001: MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
Arabidopsis Description
MYB108Transcription factor MYB108 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.