Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17207 | Sorghum | nucleus | 75.21 | 78.34 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 51.57 | 65.11 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 51.0 | 64.39 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 51.0 | 64.39 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 51.57 | 64.18 |
| CDX85422 | Canola | nucleus | 32.76 | 62.84 |
| CDX86220 | Canola | nucleus | 33.33 | 60.62 |
| Os11t0684000-01 | Rice | nucleus | 48.43 | 59.65 |
| PGSC0003DMT400011745 | Potato | nucleus | 33.33 | 50.0 |
| PGSC0003DMT400011750 | Potato | nucleus | 32.48 | 49.57 |
| Solyc12g099130.1.1 | Tomato | nucleus | 33.05 | 49.36 |
| Zm00001d048647_P001 | Maize | nucleus | 48.72 | 48.58 |
| Solyc12g099120.1.1 | Tomato | nucleus | 33.62 | 47.77 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 41.31 | 47.39 |
| AT1G48000.1 | Thale cress | nucleus | 32.76 | 47.33 |
| Solyc01g057910.2.1 | Tomato | nucleus | 37.61 | 45.99 |
| PGSC0003DMT400022600 | Potato | nucleus | 37.32 | 44.11 |
| KRH02414 | Soybean | nucleus | 39.32 | 42.86 |
| KRH50671 | Soybean | nucleus | 38.75 | 41.85 |
| Solyc05g053330.2.1 | Tomato | nucleus | 37.89 | 41.82 |
| Zm00001d040594_P001 | Maize | nucleus | 35.9 | 41.58 |
| PGSC0003DMT400069841 | Potato | nucleus | 37.89 | 41.05 |
| KRH36928 | Soybean | nucleus | 39.32 | 40.59 |
| KRG97314 | Soybean | nucleus | 39.03 | 40.18 |
| Bra020624.1-P | Field mustard | nucleus | 36.18 | 39.94 |
| CDY33891 | Canola | nucleus | 36.18 | 39.94 |
| CDY05611 | Canola | nucleus | 36.18 | 39.94 |
| AT5G49620.2 | Thale cress | nucleus | 36.47 | 39.88 |
| PGSC0003DMT400011748 | Potato | nucleus | 33.33 | 39.66 |
| Zm00001d028930_P001 | Maize | nucleus | 37.89 | 39.58 |
| Bra001202.1-P | Field mustard | nucleus | 34.19 | 39.47 |
| Bra010021.1-P | Field mustard | nucleus | 36.18 | 39.32 |
| Bra010022.1-P | Field mustard | nucleus | 36.18 | 39.32 |
| CDX99864 | Canola | nucleus | 35.04 | 38.44 |
| CDY34949 | Canola | nucleus | 35.04 | 38.44 |
| AT3G06490.1 | Thale cress | nucleus | 35.33 | 38.39 |
| Bra040274.1-P | Field mustard | nucleus | 34.76 | 38.12 |
| Solyc12g099140.1.1 | Tomato | nucleus | 32.48 | 38.0 |
| CDY24688 | Canola | nucleus | 34.19 | 37.62 |
| Zm00001d007191_P001 | Maize | nucleus | 37.04 | 37.46 |
| Zm00001d009066_P001 | Maize | nucleus | 33.9 | 37.42 |
| Bra029582.1-P | Field mustard | nucleus | 34.19 | 37.27 |
| CDY05270 | Canola | nucleus | 34.19 | 37.27 |
| Zm00001d047579_P001 | Maize | nucleus | 37.04 | 37.25 |
| Zm00001d030678_P001 | Maize | nucleus | 24.22 | 35.12 |
| Zm00001d044107_P001 | Maize | nucleus | 25.93 | 34.47 |
| Zm00001d040019_P001 | Maize | nucleus | 35.04 | 33.98 |
| Zm00001d024726_P001 | Maize | nucleus | 34.19 | 33.8 |
| Zm00001d010933_P001 | Maize | nucleus | 35.33 | 33.79 |
| Zm00001d048623_P002 | Maize | nucleus | 21.94 | 33.77 |
| CDY70282 | Canola | nucleus | 27.92 | 33.33 |
| Zm00001d041576_P001 | Maize | nucleus | 23.65 | 33.2 |
| Zm00001d008528_P001 | Maize | nucleus | 34.19 | 33.15 |
| Zm00001d048383_P001 | Maize | nucleus | 20.51 | 31.03 |
| Zm00001d017243_P001 | Maize | nucleus | 24.22 | 30.25 |
| Zm00001d024725_P001 | Maize | nucleus | 34.19 | 29.56 |
| Zm00001d027623_P001 | Maize | nucleus | 20.8 | 29.32 |
| CDX74100 | Canola | nucleus | 26.78 | 27.89 |
| Zm00001d025823_P001 | Maize | nucleus | 21.08 | 26.62 |
| Zm00001d051117_P001 | Maize | nucleus | 19.66 | 24.73 |
| Zm00001d035605_P001 | Maize | nucleus | 21.94 | 23.55 |
| Zm00001d035604_P001 | Maize | nucleus | 22.79 | 21.74 |
| CDY58600 | Canola | nucleus | 18.23 | 19.81 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100384300 | MapMan:15.5.2.1 | EMBL:BT069744 | UniProt:C0PN75 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EMBL:KJ727638 |
| InterPro:Myb_dom | ProteinID:ONM01234.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF548 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000195D1EA | EnsemblPlantsGene:Zm00001d030644 | EnsemblPlants:Zm00001d030644_P001 |
| EnsemblPlants:Zm00001d030644_T001 | SEG:seg | : | : | : | : |
Description
MYB-transcription factor 100 MYB-transcription factor 100
Coordinates
chr1:-:150483395..150485385
Molecular Weight (calculated)
38798.8 Da
IEP (calculated)
5.785
GRAVY (calculated)
-0.672
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTQSCQSR SSACSKAAAC FPAAVAVDEE HGHHSHQLKG GAQEEAENDN NKPELRRGPW TVDEDLTLVN YIADNGEGRW NNLARAAGLK RTGKSCRLRW
101: LNYLRPDVKR GNFSADEQLL ILDLHTRWGN RWSKIAQHLP GRTDNEIKNY WRTRVQKHAK QLNCDANSKR FKDAMRYLWM PHLADDVDTI AAANDDDEDH
201: HHHLRLLVLH HHQAQHLQQA AAAAGGAAND LAAGAYDVRQ LHALPSSGMA ATSSSDSLAS ESYDDGGLLF ANLRAGEMLM DGGDWAAQQE ADQGLWPPPP
301: PPPSDLDQSV VQAAGAGAGQ FQDMELSGWV QGFSESITDN FWALEEIWKM Q
101: LNYLRPDVKR GNFSADEQLL ILDLHTRWGN RWSKIAQHLP GRTDNEIKNY WRTRVQKHAK QLNCDANSKR FKDAMRYLWM PHLADDVDTI AAANDDDEDH
201: HHHLRLLVLH HHQAQHLQQA AAAAGGAAND LAAGAYDVRQ LHALPSSGMA ATSSSDSLAS ESYDDGGLLF ANLRAGEMLM DGGDWAAQQE ADQGLWPPPP
301: PPPSDLDQSV VQAAGAGAGQ FQDMELSGWV QGFSESITDN FWALEEIWKM Q
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.