Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029582.1-P | Field mustard | nucleus | 98.75 | 97.83 |
| CDY05270 | Canola | nucleus | 98.43 | 97.52 |
| AT3G06490.1 | Thale cress | nucleus | 89.66 | 88.54 |
| CDX99864 | Canola | nucleus | 86.83 | 86.56 |
| CDY34949 | Canola | nucleus | 86.83 | 86.56 |
| CDX85422 | Canola | nucleus | 46.08 | 80.33 |
| CDX86220 | Canola | nucleus | 46.08 | 76.17 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 29.78 | 74.22 |
| CDY70282 | Canola | nucleus | 67.4 | 73.13 |
| CDY05611 | Canola | nucleus | 68.97 | 69.18 |
| CDY33891 | Canola | nucleus | 68.97 | 69.18 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 39.19 | 68.68 |
| PGSC0003DMT400011745 | Potato | nucleus | 46.71 | 63.68 |
| PGSC0003DMT400011750 | Potato | nucleus | 45.45 | 63.04 |
| CDX74100 | Canola | nucleus | 64.89 | 61.42 |
| Solyc12g099130.1.1 | Tomato | nucleus | 45.14 | 61.28 |
| Solyc12g099120.1.1 | Tomato | nucleus | 46.71 | 60.32 |
| CDX86221 | Canola | nucleus | 13.17 | 60.0 |
| PGSC0003DMT400022600 | Potato | nucleus | 54.55 | 58.59 |
| Solyc01g057910.2.1 | Tomato | nucleus | 52.66 | 58.54 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 55.49 | 57.84 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 30.41 | 55.43 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 43.89 | 54.69 |
| GSMUA_Achr11P... | Banana | nucleus | 44.51 | 54.2 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 43.89 | 53.85 |
| GSMUA_Achr11P... | Banana | nucleus | 44.51 | 53.79 |
| CDY58599 | Canola | nucleus | 17.55 | 52.83 |
| PGSC0003DMT400011748 | Potato | nucleus | 47.65 | 51.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.14 | 51.25 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 43.26 | 51.11 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.63 | 50.94 |
| Solyc12g099140.1.1 | Tomato | nucleus | 47.34 | 50.33 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 42.32 | 50.19 |
| Solyc05g053330.2.1 | Tomato | nucleus | 48.9 | 49.06 |
| CDX95420 | Canola | nucleus | 35.42 | 48.71 |
| PGSC0003DMT400069841 | Potato | nucleus | 48.59 | 47.84 |
| CDY37512 | Canola | nucleus | 30.09 | 47.76 |
| CDY49063 | Canola | nucleus | 30.72 | 47.34 |
| CDX91944 | Canola | nucleus | 30.09 | 46.38 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 45.77 | 45.77 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 45.77 | 45.77 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 45.45 | 45.6 |
| TraesCSU01G069000.1 | Wheat | nucleus | 41.38 | 45.52 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.19 | 45.45 |
| CDY27504 | Canola | nucleus | 38.56 | 45.22 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 41.38 | 45.05 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 40.75 | 44.98 |
| CDX74303 | Canola | nucleus | 29.15 | 44.71 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 41.07 | 44.71 |
| CDY00146 | Canola | nucleus | 23.2 | 44.58 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 40.75 | 44.37 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 38.24 | 43.88 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 38.24 | 43.88 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 38.24 | 43.88 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 38.24 | 43.26 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 36.68 | 43.01 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 42.95 | 42.41 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 40.75 | 42.35 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 42.95 | 42.28 |
| EES00624 | Sorghum | nucleus | 40.44 | 42.16 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 36.68 | 42.09 |
| KXG39500 | Sorghum | nucleus | 44.2 | 41.96 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 40.44 | 41.88 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 42.63 | 41.85 |
| CDY20036 | Canola | nucleus | 30.41 | 41.81 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 42.32 | 41.41 |
| CDY44433 | Canola | nucleus | 30.09 | 41.38 |
| Zm00001d028930_P001 | Maize | nucleus | 43.57 | 41.37 |
| CDX80085 | Canola | nucleus | 25.71 | 41.21 |
| CDX86471 | Canola | nucleus | 29.78 | 40.95 |
| Zm00001d040594_P001 | Maize | nucleus | 38.56 | 40.59 |
| Zm00001d047579_P001 | Maize | nucleus | 43.89 | 40.11 |
| GSMUA_Achr11P... | Banana | nucleus | 42.95 | 39.83 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 35.74 | 39.72 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 45.14 | 39.02 |
| KXG36991 | Sorghum | nucleus | 41.69 | 38.89 |
| CDY69488 | Canola | nucleus | 33.54 | 38.63 |
| CDY01906 | Canola | nucleus | 34.48 | 38.6 |
| CDX96033 | Canola | nucleus | 34.17 | 38.38 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 39.5 | 38.07 |
| CDY69953 | Canola | nucleus | 33.54 | 37.94 |
| Zm00001d007191_P001 | Maize | nucleus | 41.07 | 37.75 |
| Zm00001d009066_P001 | Maize | nucleus | 37.62 | 37.74 |
| CDY42115 | Canola | nucleus | 32.29 | 37.18 |
| CDX84981 | Canola | nucleus | 33.54 | 37.15 |
| CDY03859 | Canola | nucleus | 33.23 | 36.93 |
| CDY12705 | Canola | nucleus | 32.92 | 36.84 |
| CDY54094 | Canola | nucleus | 32.6 | 36.49 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 36.68 | 35.89 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 36.68 | 35.67 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 36.99 | 35.54 |
| Zm00001d048647_P001 | Maize | nucleus | 39.19 | 35.51 |
| Zm00001d010933_P001 | Maize | nucleus | 40.44 | 35.15 |
| EES17207 | Sorghum | nucleus | 36.68 | 34.72 |
| EES10257 | Sorghum | nucleus | 39.19 | 34.25 |
| Zm00001d030644_P001 | Maize | nucleus | 37.62 | 34.19 |
| CDY70097 | Canola | nucleus | 25.08 | 33.9 |
| CDX77436 | Canola | nucleus | 27.59 | 33.85 |
| CDY61190 | Canola | nucleus | 27.27 | 33.33 |
| CDX71075 | Canola | nucleus | 25.08 | 33.2 |
| CDX80230 | Canola | nucleus | 24.45 | 32.91 |
| CDY49581 | Canola | nucleus | 24.45 | 32.91 |
| Zm00001d024726_P001 | Maize | nucleus | 36.36 | 32.68 |
| Os05t0132700-01 | Rice | nucleus | 21.94 | 32.56 |
| CDX93006 | Canola | nucleus | 27.9 | 32.48 |
| CDY49231 | Canola | nucleus | 27.27 | 32.46 |
| CDX94829 | Canola | nucleus | 27.59 | 32.23 |
| CDY64694 | Canola | nucleus | 27.59 | 32.12 |
| CDX88722 | Canola | nucleus | 24.14 | 31.82 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 36.05 | 31.68 |
| KXG21220 | Sorghum | nucleus | 39.19 | 30.79 |
| Zm00001d024725_P001 | Maize | nucleus | 39.19 | 30.79 |
| CDX86354 | Canola | nucleus | 25.71 | 30.6 |
| CDY45895 | Canola | nucleus | 24.45 | 30.35 |
| CDX73572 | Canola | nucleus | 22.88 | 29.8 |
| CDX78153 | Canola | nucleus | 22.88 | 29.8 |
| CDX85285 | Canola | nucleus | 25.08 | 29.63 |
| CDY00083 | Canola | nucleus | 24.45 | 28.89 |
| CDY19978 | Canola | nucleus | 24.14 | 28.84 |
| CDX67561 | Canola | nucleus | 21.63 | 28.75 |
| CDX86041 | Canola | nucleus | 24.76 | 28.42 |
| CDX99125 | Canola | nucleus | 24.76 | 28.42 |
| CDY13311 | Canola | nucleus | 21.63 | 28.28 |
| CDX86040 | Canola | nucleus | 24.45 | 28.06 |
| KXG21221 | Sorghum | nucleus | 38.56 | 25.79 |
| CDY35782 | Canola | nucleus | 15.99 | 24.88 |
| CDY58600 | Canola | nucleus | 21.32 | 21.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078GJB2 | UniProt:A0A078GJB2 | EnsemblPlants:CDY24688 | ProteinID:CDY24688 |
| ProteinID:CDY24688.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00027069001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEA46F | SEG:seg |
Description
BnaA05g30870DBnaA05g30870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJB2]
Coordinates
chrLK032162:-:392382..394616
Molecular Weight (calculated)
36886.5 Da
IEP (calculated)
4.559
GRAVY (calculated)
-0.896
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEKGRNLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATHG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASAAATT TNTTTTTGSA ATSSSNTTSN NQFMTYDYNN NSMGQQFGVV
201: NNDYITPENS NVAVSPMSDL TEYYSAQNTY PEYYSGQVGN NYYPDQDLVV PQILPDNYLD YSGLLDEDLA VMQEQSNLNW FEEINGATSS SDSLWNIGES
301: DEDLWFLQDQ QQFNNNGNF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASAAATT TNTTTTTGSA ATSSSNTTSN NQFMTYDYNN NSMGQQFGVV
201: NNDYITPENS NVAVSPMSDL TEYYSAQNTY PEYYSGQVGN NYYPDQDLVV PQILPDNYLD YSGLLDEDLA VMQEQSNLNW FEEINGATSS SDSLWNIGES
301: DEDLWFLQDQ QQFNNNGNF
001: MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
Arabidopsis Description
MYB108Transcription factor MYB108 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.