Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d007191_P001 | Maize | nucleus | 83.63 | 82.42 |
| CDX85422 | Canola | nucleus | 36.55 | 68.31 |
| CDX86220 | Canola | nucleus | 36.26 | 64.25 |
| Solyc12g099130.1.1 | Tomato | nucleus | 35.38 | 51.49 |
| PGSC0003DMT400011745 | Potato | nucleus | 34.5 | 50.43 |
| PGSC0003DMT400011750 | Potato | nucleus | 33.63 | 50.0 |
| AT1G48000.1 | Thale cress | nucleus | 35.38 | 49.79 |
| Solyc12g099120.1.1 | Tomato | nucleus | 35.67 | 49.39 |
| Os07t0688200-01 | Rice | nucleus | 42.11 | 48.0 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 42.4 | 47.39 |
| Solyc01g057910.2.1 | Tomato | nucleus | 39.18 | 46.69 |
| PGSC0003DMT400022600 | Potato | nucleus | 39.47 | 45.45 |
| Bra001202.1-P | Field mustard | nucleus | 39.18 | 44.08 |
| KXG39500 | Sorghum | nucleus | 43.27 | 44.05 |
| CDY33891 | Canola | nucleus | 40.94 | 44.03 |
| CDY05611 | Canola | nucleus | 40.94 | 44.03 |
| Bra020624.1-P | Field mustard | nucleus | 40.94 | 44.03 |
| KRH02414 | Soybean | nucleus | 40.64 | 43.17 |
| EES00624 | Sorghum | nucleus | 38.6 | 43.14 |
| KRH50671 | Soybean | nucleus | 40.94 | 43.08 |
| Solyc05g053330.2.1 | Tomato | nucleus | 38.89 | 41.82 |
| PGSC0003DMT400011748 | Potato | nucleus | 35.96 | 41.69 |
| CDY24688 | Canola | nucleus | 38.89 | 41.69 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 40.35 | 41.57 |
| Bra010021.1-P | Field mustard | nucleus | 39.18 | 41.49 |
| Bra010022.1-P | Field mustard | nucleus | 39.18 | 41.49 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 39.47 | 41.41 |
| Bra029582.1-P | Field mustard | nucleus | 38.89 | 41.3 |
| CDY05270 | Canola | nucleus | 38.89 | 41.3 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 39.47 | 41.16 |
| Solyc12g099140.1.1 | Tomato | nucleus | 35.67 | 40.67 |
| KRH36928 | Soybean | nucleus | 40.35 | 40.59 |
| AT5G49620.2 | Thale cress | nucleus | 38.01 | 40.5 |
| AT3G06490.1 | Thale cress | nucleus | 38.01 | 40.25 |
| PGSC0003DMT400069841 | Potato | nucleus | 38.01 | 40.12 |
| Bra040274.1-P | Field mustard | nucleus | 37.43 | 40.0 |
| CDX99864 | Canola | nucleus | 37.43 | 40.0 |
| CDY34949 | Canola | nucleus | 37.43 | 40.0 |
| KRG97314 | Soybean | nucleus | 39.77 | 39.88 |
| EES17207 | Sorghum | nucleus | 38.01 | 38.58 |
| CDY70282 | Canola | nucleus | 32.46 | 37.76 |
| KXG29192 | Sorghum | nucleus | 24.56 | 36.84 |
| KXG23736 | Sorghum | nucleus | 25.73 | 36.67 |
| EES10257 | Sorghum | nucleus | 38.01 | 35.62 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 37.72 | 35.54 |
| KXG21220 | Sorghum | nucleus | 39.77 | 33.5 |
| EES00381 | Sorghum | nucleus | 37.72 | 33.16 |
| KXG29190 | Sorghum | nucleus | 19.59 | 31.6 |
| EES01143 | Sorghum | nucleus | 26.9 | 31.4 |
| EES07157 | Sorghum | nucleus | 26.32 | 31.25 |
| CDX74100 | Canola | nucleus | 30.7 | 31.16 |
| EER92876 | Sorghum | nucleus | 22.81 | 30.83 |
| KXG26684 | Sorghum | nucleus | 23.98 | 29.08 |
| OQU77249 | Sorghum | nucleus | 25.73 | 28.57 |
| EES17592 | Sorghum | nucleus | 27.49 | 28.14 |
| KXG21221 | Sorghum | nucleus | 38.6 | 27.67 |
| CDY58600 | Canola | nucleus | 21.93 | 23.22 |
Protein Annotations
| EnsemblPlants:KXG36991 | EnsemblPlantsGene:SORBI_3002G423300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF908 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:KXG36991 | ProteinID:KXG36991.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0003C70768 | UniProt:A0A1B6QGD9 | MapMan:15.5.2.1 | : |
Description
hypothetical protein
Coordinates
chr2:-:77050089..77051609
Molecular Weight (calculated)
37291.6 Da
IEP (calculated)
5.026
GRAVY (calculated)
-0.425
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARDRRELS SDEESAAAAA GDLRRGPWTV EEDMLLVNYV AAHGEGRWNA LARCAGLRRT GKSCRLRWLN YLRPDLRRGN ITAQEQLLIL ELHSRWGNRW
101: SKIAQHLPGR TDNEIKNYWR TRVQKHARQL NCDVNSQQFK DLMRYIWMPR LLERIGSDDS GDGAVVIDAA VHADATPSPT PTLQPQPQPL LTAAAWPVDD
201: VELSCTTAVS SSSVSTDSMH HHQQLAAVSP PPPPPPAVAS AAFGESNNDG SYYGIDNSNT AMSMWDTLCQ PPHSTTAQLA GAGTCGWSDE SLLVVPSGLL
301: GDGGVYADMG FPDLCDTDTM TMWAAGAGSS ADDLWYTQTM GL
101: SKIAQHLPGR TDNEIKNYWR TRVQKHARQL NCDVNSQQFK DLMRYIWMPR LLERIGSDDS GDGAVVIDAA VHADATPSPT PTLQPQPQPL LTAAAWPVDD
201: VELSCTTAVS SSSVSTDSMH HHQQLAAVSP PPPPPPAVAS AAFGESNNDG SYYGIDNSNT AMSMWDTLCQ PPHSTTAQLA GAGTCGWSDE SLLVVPSGLL
301: GDGGVYADMG FPDLCDTDTM TMWAAGAGSS ADDLWYTQTM GL
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.