Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99864 | Canola | nucleus | 100.0 | 100.0 |
| Bra040274.1-P | Field mustard | nucleus | 99.38 | 99.38 |
| CDY24688 | Canola | nucleus | 86.56 | 86.83 |
| CDY05270 | Canola | nucleus | 86.56 | 86.02 |
| CDX85422 | Canola | nucleus | 45.62 | 79.78 |
| CDY70282 | Canola | nucleus | 72.19 | 78.57 |
| CDX86220 | Canola | nucleus | 45.31 | 75.13 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 30.0 | 75.0 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 38.75 | 68.13 |
| CDY05611 | Canola | nucleus | 66.88 | 67.3 |
| CDY33891 | Canola | nucleus | 66.88 | 67.3 |
| CDX74100 | Canola | nucleus | 68.44 | 64.99 |
| PGSC0003DMT400011745 | Potato | nucleus | 45.94 | 62.82 |
| PGSC0003DMT400011750 | Potato | nucleus | 44.69 | 62.17 |
| Solyc01g057910.2.1 | Tomato | nucleus | 54.06 | 60.28 |
| PGSC0003DMT400022600 | Potato | nucleus | 55.94 | 60.27 |
| Solyc12g099130.1.1 | Tomato | nucleus | 44.06 | 60.0 |
| Solyc12g099120.1.1 | Tomato | nucleus | 46.25 | 59.92 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 54.69 | 57.19 |
| CDX86221 | Canola | nucleus | 12.5 | 57.14 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 30.31 | 55.43 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 43.75 | 54.69 |
| GSMUA_Achr11P... | Banana | nucleus | 44.06 | 53.82 |
| GSMUA_Achr11P... | Banana | nucleus | 44.06 | 53.41 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 42.81 | 52.69 |
| CDY58599 | Canola | nucleus | 17.19 | 51.89 |
| PGSC0003DMT400011748 | Potato | nucleus | 47.5 | 51.53 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.81 | 51.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.0 | 51.25 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 42.81 | 50.74 |
| Solyc05g053330.2.1 | Tomato | nucleus | 49.38 | 49.69 |
| Solyc12g099140.1.1 | Tomato | nucleus | 46.56 | 49.67 |
| PGSC0003DMT400069841 | Potato | nucleus | 50.0 | 49.38 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 41.25 | 49.07 |
| CDX95420 | Canola | nucleus | 34.38 | 47.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.38 | 45.82 |
| CDY37512 | Canola | nucleus | 28.75 | 45.77 |
| CDY27504 | Canola | nucleus | 38.44 | 45.22 |
| CDY00146 | Canola | nucleus | 23.44 | 45.18 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 45.0 | 45.14 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 45.0 | 45.14 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 44.69 | 44.97 |
| CDY49063 | Canola | nucleus | 29.06 | 44.93 |
| TraesCSU01G069000.1 | Wheat | nucleus | 40.62 | 44.83 |
| CDX91944 | Canola | nucleus | 28.75 | 44.44 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 40.62 | 44.37 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 40.0 | 44.29 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 40.31 | 44.03 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 37.81 | 43.53 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 39.69 | 43.34 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 37.5 | 43.17 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 37.5 | 43.17 |
| CDX74303 | Canola | nucleus | 27.81 | 42.79 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 37.5 | 42.55 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 36.88 | 42.45 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 35.94 | 42.28 |
| CDY20036 | Canola | nucleus | 30.62 | 42.24 |
| CDY44433 | Canola | nucleus | 30.62 | 42.24 |
| KXG39500 | Sorghum | nucleus | 44.06 | 41.96 |
| CDX86471 | Canola | nucleus | 30.31 | 41.81 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 42.19 | 41.8 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 40.0 | 41.69 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 42.19 | 41.67 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 42.19 | 41.54 |
| Zm00001d028930_P001 | Maize | nucleus | 43.44 | 41.37 |
| EES00624 | Sorghum | nucleus | 39.38 | 41.18 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 41.88 | 41.1 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 39.06 | 40.58 |
| Zm00001d040594_P001 | Maize | nucleus | 37.81 | 39.93 |
| Zm00001d047579_P001 | Maize | nucleus | 43.44 | 39.83 |
| CDX80085 | Canola | nucleus | 24.69 | 39.7 |
| GSMUA_Achr11P... | Banana | nucleus | 42.19 | 39.24 |
| CDY69488 | Canola | nucleus | 33.44 | 38.63 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 44.38 | 38.48 |
| CDY01906 | Canola | nucleus | 34.06 | 38.25 |
| CDX96033 | Canola | nucleus | 33.75 | 38.03 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 34.06 | 37.98 |
| CDY69953 | Canola | nucleus | 33.44 | 37.94 |
| CDY42115 | Canola | nucleus | 32.5 | 37.55 |
| CDX84981 | Canola | nucleus | 33.75 | 37.5 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 38.75 | 37.46 |
| KXG36991 | Sorghum | nucleus | 40.0 | 37.43 |
| Zm00001d009066_P001 | Maize | nucleus | 37.19 | 37.42 |
| CDY03859 | Canola | nucleus | 33.44 | 37.28 |
| Zm00001d007191_P001 | Maize | nucleus | 39.69 | 36.6 |
| CDY12705 | Canola | nucleus | 32.5 | 36.49 |
| CDY54094 | Canola | nucleus | 32.19 | 36.14 |
| Zm00001d048647_P001 | Maize | nucleus | 39.38 | 35.8 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 36.25 | 35.37 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 35.94 | 35.28 |
| Zm00001d030644_P001 | Maize | nucleus | 38.44 | 35.04 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 36.25 | 34.94 |
| Zm00001d010933_P001 | Maize | nucleus | 40.0 | 34.88 |
| EES17207 | Sorghum | nucleus | 36.56 | 34.72 |
| EES10257 | Sorghum | nucleus | 38.75 | 33.97 |
| CDX77436 | Canola | nucleus | 27.5 | 33.85 |
| Os05t0132700-01 | Rice | nucleus | 22.5 | 33.49 |
| CDY70097 | Canola | nucleus | 24.38 | 33.05 |
| CDY61190 | Canola | nucleus | 26.88 | 32.95 |
| CDX71075 | Canola | nucleus | 24.69 | 32.78 |
| Zm00001d024726_P001 | Maize | nucleus | 36.25 | 32.68 |
| CDX80230 | Canola | nucleus | 24.06 | 32.49 |
| CDY49581 | Canola | nucleus | 24.06 | 32.49 |
| CDY49231 | Canola | nucleus | 27.19 | 32.46 |
| CDX93006 | Canola | nucleus | 27.5 | 32.12 |
| CDX94829 | Canola | nucleus | 27.19 | 31.87 |
| CDY64694 | Canola | nucleus | 27.19 | 31.75 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 35.31 | 31.13 |
| KXG21220 | Sorghum | nucleus | 39.38 | 31.03 |
| CDX88722 | Canola | nucleus | 23.44 | 30.99 |
| CDX86354 | Canola | nucleus | 25.94 | 30.97 |
| Zm00001d024725_P001 | Maize | nucleus | 39.06 | 30.79 |
| CDY45895 | Canola | nucleus | 24.69 | 30.74 |
| CDX85285 | Canola | nucleus | 25.31 | 30.0 |
| CDX73572 | Canola | nucleus | 22.81 | 29.8 |
| CDX78153 | Canola | nucleus | 22.81 | 29.8 |
| CDY00083 | Canola | nucleus | 25.0 | 29.63 |
| CDY19978 | Canola | nucleus | 24.69 | 29.59 |
| CDX67561 | Canola | nucleus | 22.19 | 29.58 |
| CDY13311 | Canola | nucleus | 21.56 | 28.28 |
| CDX86041 | Canola | nucleus | 24.38 | 28.06 |
| CDX99125 | Canola | nucleus | 24.38 | 28.06 |
| CDX86040 | Canola | nucleus | 24.06 | 27.7 |
| KXG21221 | Sorghum | nucleus | 38.12 | 25.58 |
| CDY35782 | Canola | nucleus | 15.94 | 24.88 |
| CDY58600 | Canola | nucleus | 20.62 | 20.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HBX8 | UniProt:A0A078HBX8 | EnsemblPlants:CDY34949 | ProteinID:CDY34949 |
| ProteinID:CDY34949.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00057532001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDFB3C | SEG:seg |
Description
BnaA01g32800DBnaA01g32800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBX8]
Coordinates
chrLK032343:-:373333..375616
Molecular Weight (calculated)
36853.5 Da
IEP (calculated)
4.668
GRAVY (calculated)
-0.872
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MDERGRSLKN NNMEDDMDLK RGPWTAEEDC KLINYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASAAA LTNATTTGSA ATSSCIITSN NQFMTYDYNN NSMGQQFGVM
201: NNNDYITPEN SSVALSPVSD LTDYYNAPNP NPEYHSGQVG NSYYPDQNLV GPQMLPDDYF DYSRLLDEDV PAMQEQSNLN WFENINGAAS SSDSLWDIGE
301: NDEDFWFLQQ QQQFNNNGNF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASAAA LTNATTTGSA ATSSCIITSN NQFMTYDYNN NSMGQQFGVM
201: NNNDYITPEN SSVALSPVSD LTDYYNAPNP NPEYHSGQVG NSYYPDQNLV GPQMLPDDYF DYSRLLDEDV PAMQEQSNLN WFENINGAAS SSDSLWDIGE
301: NDEDFWFLQQ QQQFNNNGNF
001: MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF
Arabidopsis Description
MYB108Transcription factor MYB108 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.