Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G413700.1 | Wheat | nucleus | 80.66 | 91.13 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 80.97 | 87.3 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 78.85 | 84.74 |
| Os01t0298400-01 | Rice | extracellular, nucleus | 60.12 | 67.92 |
| CDX85422 | Canola | nucleus | 34.74 | 62.84 |
| CDX86220 | Canola | nucleus | 34.74 | 59.59 |
| Zm00001d040594_P001 | Maize | nucleus | 50.76 | 55.45 |
| EES00624 | Sorghum | nucleus | 51.06 | 55.23 |
| Zm00001d009066_P001 | Maize | nucleus | 51.66 | 53.77 |
| PGSC0003DMT400011750 | Potato | nucleus | 32.93 | 47.39 |
| PGSC0003DMT400011745 | Potato | nucleus | 32.93 | 46.58 |
| Solyc12g099130.1.1 | Tomato | nucleus | 32.93 | 46.38 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 40.79 | 46.08 |
| Solyc01g057910.2.1 | Tomato | nucleus | 38.97 | 44.95 |
| AT1G48000.1 | Thale cress | nucleus | 32.93 | 44.86 |
| Solyc12g099120.1.1 | Tomato | nucleus | 33.23 | 44.53 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 40.48 | 43.79 |
| PGSC0003DMT400022600 | Potato | nucleus | 38.97 | 43.43 |
| CDY33891 | Canola | nucleus | 40.18 | 41.82 |
| Bra020624.1-P | Field mustard | nucleus | 40.18 | 41.82 |
| CDY05611 | Canola | nucleus | 40.18 | 41.82 |
| KRH02414 | Soybean | nucleus | 39.88 | 40.99 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 40.18 | 40.92 |
| Bra001202.1-P | Field mustard | nucleus | 37.46 | 40.79 |
| KRH50671 | Soybean | nucleus | 39.58 | 40.31 |
| Bra010022.1-P | Field mustard | nucleus | 38.97 | 39.94 |
| Bra010021.1-P | Field mustard | nucleus | 38.97 | 39.94 |
| AT5G49620.2 | Thale cress | nucleus | 38.37 | 39.56 |
| CDY24688 | Canola | nucleus | 38.07 | 39.5 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 33.53 | 39.36 |
| PGSC0003DMT400011748 | Potato | nucleus | 35.05 | 39.32 |
| Bra029582.1-P | Field mustard | nucleus | 38.07 | 39.13 |
| Solyc05g053330.2.1 | Tomato | nucleus | 37.46 | 38.99 |
| CDX99864 | Canola | nucleus | 37.46 | 38.75 |
| Bra040274.1-P | Field mustard | nucleus | 37.46 | 38.75 |
| CDY34949 | Canola | nucleus | 37.46 | 38.75 |
| AT3G06490.1 | Thale cress | nucleus | 37.76 | 38.7 |
| CDY05270 | Canola | nucleus | 37.46 | 38.51 |
| KRG97314 | Soybean | nucleus | 39.58 | 38.42 |
| Solyc12g099140.1.1 | Tomato | nucleus | 34.74 | 38.33 |
| KRH36928 | Soybean | nucleus | 39.27 | 38.24 |
| PGSC0003DMT400069841 | Potato | nucleus | 36.86 | 37.65 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 23.57 | 36.79 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 39.58 | 35.5 |
| CDY70282 | Canola | nucleus | 31.12 | 35.03 |
| GSMUA_Achr11P... | Banana | nucleus | 36.25 | 34.88 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 22.66 | 33.33 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 25.68 | 32.82 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 23.26 | 32.49 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 24.77 | 30.37 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 33.23 | 30.3 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 26.59 | 30.03 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 22.96 | 29.46 |
| CDX74100 | Canola | nucleus | 29.91 | 29.38 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 30.82 | 29.06 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 23.26 | 28.62 |
| CDY58600 | Canola | nucleus | 19.03 | 19.5 |
| HORVU5Hr1G022710.1 | Barley | cytosol, nucleus | 2.72 | 13.04 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A287MAZ8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | EnsemblPlantsGene:HORVU3Hr1G092820 | EnsemblPlants:HORVU3Hr1G092820.1 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF659 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000B488001 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:640330869..640332232
Molecular Weight (calculated)
36775.9 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.564
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: LRQQTTTPAY PSRTACSSSL QSSRPLRIQL TPATMDHLDY FGSTGMDAVW TGTSCGWPAA AATTGGEEAV DQNLRRGPWT MDEDALLAGH IAKHGEGRWN
101: ELACAAGLRR TGKSCRLRWL NYLRPDVRRG DFTPQEQLLI LELHFRWGNR WSRIAREMPG RTDNEIKNYW RTRVQKHAKQ LRCDVDSRQF RDVMRHLWMP
201: RLVERIHAAA AAAPAPSMER AASPMYHSPD TTAVTTSSTA GSSVSLEVQF PSNQLVLTAG SATNWSGSGS EQCGSGSGSA RSDDMFDGSW SELLARACDD
301: GADSVVFPDF EFGESIDDKW SLEDILLQQQ Y
101: ELACAAGLRR TGKSCRLRWL NYLRPDVRRG DFTPQEQLLI LELHFRWGNR WSRIAREMPG RTDNEIKNYW RTRVQKHAKQ LRCDVDSRQF RDVMRHLWMP
201: RLVERIHAAA AAAPAPSMER AASPMYHSPD TTAVTTSSTA GSSVSLEVQF PSNQLVLTAG SATNWSGSGS EQCGSGSGSA RSDDMFDGSW SELLARACDD
301: GADSVVFPDF EFGESIDDKW SLEDILLQQQ Y
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.