Factsheet for Bra010022.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010021.1-P	Field mustard	nucleus	100.0	100.0
CDX85422	Canola	nucleus	54.18	95.63
CDX86220	Canola	nucleus	53.25	89.12
Bra020624.1-P	Field mustard	nucleus	81.42	82.7
GSMUA_Achr4P19990_001	Banana	nucleus	30.03	75.78
AT5G49620.2	Thale cress	nucleus	70.9	71.34
Bra001202.1-P	Field mustard	nucleus	65.02	69.08
GSMUA_Achr5P21090_001	Banana	nucleus	38.7	68.68
Bra029582.1-P	Field mustard	nucleus	66.87	67.08
Bra040274.1-P	Field mustard	nucleus	65.63	66.25
PGSC0003DMT400011745	Potato	nucleus	45.51	62.82
PGSC0003DMT400011750	Potato	nucleus	44.27	62.17
Solyc12g099130.1.1	Tomato	nucleus	43.65	60.0
Solyc12g099120.1.1	Tomato	nucleus	45.82	59.92
Solyc01g057910.2.1	Tomato	nucleus	50.46	56.79
GSMUA_Achr3P12730_001	Banana	nucleus	30.65	56.57
PGSC0003DMT400022600	Potato	nucleus	52.01	56.57
VIT_05s0077g00500.t01	Wine grape	nucleus	52.01	54.9
GSMUA_Achr11P...	Banana	nucleus	43.65	53.82
GSMUA_Achr8P10800_001	Banana	nucleus	42.11	53.12
GSMUA_Achr9P16640_001	Banana	nucleus	42.11	52.31
GSMUA_Achr11P...	Banana	nucleus	42.41	51.89
GSMUA_AchrUn_...	Banana	nucleus	42.72	51.69
PGSC0003DMT400011748	Potato	nucleus	46.75	51.19
Solyc12g099140.1.1	Tomato	nucleus	47.37	51.0
GSMUA_Achr1P24960_001	Banana	nucleus	42.41	50.74
GSMUA_Achr8P29910_001	Banana	nucleus	42.11	50.56
GSMUA_AchrUn_...	Banana	nucleus	43.65	50.18
KRH02414	Soybean	nucleus	49.85	50.0
KRH50671	Soybean	nucleus	50.15	49.85
Bra004473.1-P	Field mustard	nucleus	41.49	48.73
KRH36928	Soybean	nucleus	50.15	47.65
Solyc05g053330.2.1	Tomato	nucleus	46.75	47.48
KRG97314	Soybean	nucleus	49.85	47.21
Bra039108.1-P	Field mustard	nucleus	29.72	46.83
Bra021389.1-P	Field mustard	nucleus	39.32	46.69
TraesCS4A01G124900.1	Wheat	nucleus	45.2	45.77
TraesCS4D01G181100.1	Wheat	nucleus	44.89	45.45
PGSC0003DMT400069841	Potato	nucleus	45.51	45.37
TraesCS5B01G093000.1	Wheat	nucleus	39.01	45.32
TraesCS5D01G099100.1	Wheat	nucleus	39.01	45.32
TraesCS4B01G179500.1	Wheat	nucleus	44.58	45.28
GSMUA_AchrUn_...	Banana	nucleus	38.39	45.09
TraesCS4A01G172200.1	Wheat	nucleus	40.25	44.98
TraesCS5A01G087100.1	Wheat	nucleus	38.7	44.96
HORVU5Hr1G022690.1	Barley	nucleus	39.01	44.68
TraesCSU01G069000.1	Wheat	nucleus	39.94	44.48
TraesCS4D01G142900.1	Wheat	nucleus	39.94	44.03
Bra001005.1-P	Field mustard	nucleus	28.17	43.75
HORVU4Hr1G028780.1	Barley	nucleus	39.63	43.69
TraesCS3D01G413700.1	Wheat	nucleus	39.63	43.69
Bra039067.1-P	Field mustard	nucleus	30.65	42.67
GSMUA_Achr7P05570_001	Banana	nucleus	35.6	42.28
TraesCS3B01G453300.1	Wheat	nucleus	39.94	42.02
Bra025300.1-P	Field mustard	nucleus	30.03	41.81
KXG39500	Sorghum	nucleus	43.34	41.67
Zm00001d028930_P001	Maize	nucleus	43.03	41.37
TraesCS3D01G014800.1	Wheat	nucleus	35.6	41.37
TraesCS3A01G418100.1	Wheat	nucleus	39.32	41.23
TraesCS1A01G076200.1	Wheat	nucleus	40.56	40.43
TraesCS1D01G078600.1	Wheat	nucleus	40.25	40.25
EES00624	Sorghum	nucleus	38.08	40.2
GSMUA_Achr11P...	Banana	nucleus	42.72	40.12
HORVU1Hr1G016420.1	Barley	nucleus	40.25	40.0
TraesCS1B01G094500.1	Wheat	nucleus	40.25	39.88
Zm00001d040594_P001	Maize	nucleus	36.84	39.27
KXG36991	Sorghum	nucleus	41.49	39.18
Bra004297.1-P	Field mustard	nucleus	34.37	39.08
HORVU3Hr1G092820.1	Barley	nucleus	39.94	38.97
Zm00001d047579_P001	Maize	nucleus	42.11	38.97
HORVU4Hr1G052490.5	Barley	nucleus, plastid	44.27	38.75
Bra004041.1-P	Field mustard	nucleus	33.75	38.65
Zm00001d007191_P001	Maize	nucleus	41.49	38.62
Bra012482.1-P	Field mustard	nucleus	33.13	37.68
GSMUA_Achr3P08370_001	Banana	nucleus	33.44	37.63
Bra033948.1-P	Field mustard	nucleus	33.13	37.54
TraesCS2A01G097200.1	Wheat	nucleus	37.46	37.12
EES17207	Sorghum	nucleus	38.7	37.09
TraesCS2B01G112600.1	Wheat	nucleus	37.77	36.75
TraesCS2D01G096000.1	Wheat	nucleus	37.15	36.59
Zm00001d009066_P001	Maize	nucleus	35.91	36.48
Zm00001d030644_P001	Maize	nucleus	39.32	36.18
Bra024760.1-P	Field mustard	nucleus	29.41	35.71
Zm00001d010933_P001	Maize	nucleus	39.94	35.15
EES10257	Sorghum	nucleus	39.63	35.07
Zm00001d048647_P001	Maize	nucleus	37.77	34.66
Zm00001d024726_P001	Maize	nucleus	37.46	34.08
Bra020289.1-P	Field mustard	nucleus	24.46	33.47
Os05t0132700-01	Rice	nucleus	21.98	33.02
HORVU2Hr1G016380.1	Barley	nucleus	36.84	32.78
Bra002533.1-P	Field mustard	nucleus	23.84	32.49
KXG21220	Sorghum	nucleus	40.25	32.02
Bra006694.1-P	Field mustard	nucleus	23.84	31.82
Zm00001d024725_P001	Maize	nucleus	39.94	31.77
Bra015029.1-P	Field mustard	nucleus	26.32	31.37
Bra018223.1-P	Field mustard	nucleus	24.46	31.35
Bra028550.1-P	Field mustard	nucleus	22.91	30.83
Bra001941.1-P	Field mustard	nucleus	26.01	30.66
Bra006977.1-P	Field mustard	nucleus	23.22	30.61
Bra020744.1-P	Field mustard	nucleus	24.15	30.35
Bra028369.1-P	Field mustard	nucleus	25.7	30.29
Bra025410.1-P	Field mustard	nucleus	25.08	30.22
Bra036202.1-P	Field mustard	nucleus	23.84	28.84
KXG21221	Sorghum	nucleus	39.32	26.62

Protein Annotations

EnsemblPlants:Bra010022.1	EnsemblPlants:Bra010022.1-P	EnsemblPlantsGene:Bra010022	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF743	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000253EE6F	UniProt:M4D0M3	MapMan:15.5.2.1	:	:

Description

AT5G49620 (E=2e-106) AtMYB78 | AtMYB78 (myb domain protein 78); DNA binding / transcription factor

Coordinates

chrA06:+:18689370..18691217

Molecular Weight (calculated)

36494.7 Da

IEP (calculated)

5.453

GRAVY (calculated)

-0.654

Length

323 amino acids

Sequence
(BLAST)

001: MDGKRSLEIN KNMGDFENNV DDEMDLRRGP WTVEEDFKLS NYISTLGEGR WNSLARCAGL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHSRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA ASASSTTGSA AKSCVTTTTD QFLITSYDGG ANNNNTNIDH
201: LGLTSNPNGY VTSGTSSVTV SPASGLTEYN IGSEVGQIET SFDPVQSLVG PQIMLPSQNY LDDKSGLLNG GLGAMQEQSY PNLFENINGM IPSYSDSFWN
301: IGSDEDFWLL QQQQQQLLNN GSF

Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)

001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF

Arabidopsis Description

AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.