Factsheet for Bra020289.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70097	Canola	nucleus	100.0	100.0
Bra006694.1-P	Field mustard	nucleus	91.95	89.67
Bra002533.1-P	Field mustard	nucleus	89.83	89.45
AT5G59780.3	Thale cress	nucleus	88.98	89.36
Bra018223.1-P	Field mustard	nucleus	76.69	71.83
GSMUA_Achr2P16200_001	Banana	nucleus	49.58	57.07
GSMUA_Achr6P15370_001	Banana	nucleus	49.58	55.98
HORVU5Hr1G021750.2	Barley	nucleus	55.93	55.7
TraesCS4D01G142300.1	Wheat	nucleus	55.93	55.46
TraesCS4B01G143700.1	Wheat	nucleus	55.93	55.46
VIT_06s0004g04140.t01	Wine grape	nucleus	59.75	55.08
TraesCS4A01G173300.2	Wheat	nucleus	55.51	55.04
TraesCS5B01G089200.1	Wheat	nucleus	55.08	54.85
TraesCS5D01G095600.1	Wheat	nucleus	54.66	54.43
GSMUA_Achr10P...	Banana	nucleus	52.12	54.42
TraesCS5A01G083100.1	Wheat	nucleus	54.24	54.01
Solyc11g073120.1.1	Tomato	nucleus	49.58	53.92
KRH10298	Soybean	nucleus	58.05	53.73
PGSC0003DMT400040149	Potato	nucleus	49.58	53.67
KXG23736	Sorghum	nucleus	53.81	52.92
Os12t0567300-00	Rice	nucleus	54.24	52.89
KRH23019	Soybean	nucleus	58.9	52.65
GSMUA_Achr10P...	Banana	nucleus	52.54	52.54
Os11t0700500-01	Rice	nucleus	52.54	52.32
GSMUA_Achr11P...	Banana	nucleus	53.39	52.28
GSMUA_Achr10P...	Banana	nucleus	46.61	51.89
GSMUA_Achr9P28370_001	Banana	nucleus	47.03	51.87
Zm00001d030678_P001	Maize	nucleus	52.97	51.65
Zm00001d041576_P001	Maize	nucleus	54.24	51.2
GSMUA_Achr5P28350_001	Banana	nucleus	51.27	51.05
KXG29192	Sorghum	nucleus	49.15	50.88
Solyc06g005330.2.1	Tomato	nucleus	50.85	50.85
Zm00001d048623_P002	Maize	nucleus	48.73	50.44
KRH29850	Soybean	nucleus	56.36	50.0
KRH24842	Soybean	nucleus	55.93	49.62
GSMUA_Achr7P18200_001	Banana	nucleus	50.42	49.38
GSMUA_Achr8P34340_001	Banana	nucleus	50.85	48.98
GSMUA_Achr8P02640_001	Banana	nucleus	45.76	45.76
TraesCS1D01G043300.1	Wheat	nucleus	45.76	42.52
TraesCS1B01G055200.1	Wheat	nucleus	46.19	40.67
HORVU1Hr1G008810.3	Barley	nucleus	44.07	40.31
TraesCS1A01G042700.1	Wheat	nucleus	44.07	39.54
TraesCS3D01G540600.1	Wheat	nucleus	42.37	39.06
TraesCS3A01G535100.1	Wheat	nucleus	42.8	38.85
TraesCS3B01G612200.2	Wheat	nucleus	42.37	37.88
Bra039108.1-P	Field mustard	nucleus	30.93	35.61
Os01t0975300-01	Rice	vacuole	31.36	35.24
Bra006977.1-P	Field mustard	nucleus	36.44	35.1
Bra001005.1-P	Field mustard	nucleus	30.51	34.62
Bra028550.1-P	Field mustard	nucleus	34.75	34.17
KXG29190	Sorghum	nucleus	30.08	33.49
Bra039067.1-P	Field mustard	nucleus	32.63	33.19
OQU77249	Sorghum	nucleus	43.22	33.12
Bra025300.1-P	Field mustard	nucleus	32.2	32.76
Zm00001d035605_P001	Maize	nucleus	43.22	31.19
Bra020744.1-P	Field mustard	nucleus	33.05	30.35
Bra025410.1-P	Field mustard	nucleus	34.32	30.22
Bra036202.1-P	Field mustard	nucleus	33.9	29.96
Bra021389.1-P	Field mustard	nucleus	34.32	29.78
EES17592	Sorghum	nucleus	41.95	29.64
Bra004473.1-P	Field mustard	nucleus	34.32	29.45
Bra012482.1-P	Field mustard	nucleus	35.17	29.23
Bra015029.1-P	Field mustard	nucleus	33.47	29.15
Bra028369.1-P	Field mustard	nucleus	33.47	28.83
Bra001941.1-P	Field mustard	nucleus	33.47	28.83
Bra004041.1-P	Field mustard	nucleus	34.32	28.72
Bra004297.1-P	Field mustard	nucleus	33.9	28.17
Bra033948.1-P	Field mustard	nucleus	32.63	27.02
Zm00001d035604_P001	Maize	nucleus	41.95	26.9
Bra024760.1-P	Field mustard	nucleus	30.08	26.69
Bra001202.1-P	Field mustard	nucleus	34.32	26.64
Bra029582.1-P	Field mustard	nucleus	33.9	24.84
Bra020624.1-P	Field mustard	nucleus	33.47	24.84
Bra010021.1-P	Field mustard	nucleus	33.47	24.46
Bra010022.1-P	Field mustard	nucleus	33.47	24.46
Bra040274.1-P	Field mustard	nucleus	33.05	24.38

Protein Annotations

EnsemblPlants:Bra020289.1	EnsemblPlants:Bra020289.1-P	EnsemblPlantsGene:Bra020289	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF484	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00025435FF	UniProt:M4DUU6	MapMan:15.5.2.1	:	:

Description

AT5G59780 (E=2e-115) MYB59, ATMYB59-3 | MYB59 (MYB DOMAIN PROTEIN 59); DNA binding / transcription factor

Coordinates

chrA02:+:6055186..6056114

Molecular Weight (calculated)

27362.2 Da

IEP (calculated)

9.285

GRAVY (calculated)

-0.808

Length

236 amino acids

Sequence
(BLAST)

001: MKNVQAEYRK GPWTEQEDIL LVNFVHMFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPEE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK IAQEKKRPMS PTSSSSNFCS SSMTTATTQD TGGSKGKMNH DGYYSMDDIW REIDQSGESI TKPVKDIYYS EQSCYLNFPP LASPAWESSL
201: ESIWNMDADE SKISSFAIDQ FPLTFEHGRS SWSSLV

Best Arabidopsis Sequence Match ( AT5G59780.3 )
(BLAST)

001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL

Arabidopsis Description

MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.