Factsheet for Bra020744.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45895	Canola	nucleus	100.0	100.0
Bra025410.1-P	Field mustard	nucleus	78.99	75.75
Bra036202.1-P	Field mustard	nucleus	75.88	73.03
AT3G30210.1	Thale cress	nucleus	75.1	69.93
PGSC0003DMT400003479	Potato	nucleus	45.14	48.74
VIT_14s0083g01060.t01	Wine grape	nucleus	45.91	47.77
Solyc02g089190.1.1	Tomato	nucleus	43.58	46.86
GSMUA_Achr4P29230_001	Banana	nucleus	35.8	45.1
GSMUA_Achr11P...	Banana	nucleus	37.35	45.07
KRH01379	Soybean	nucleus	44.75	44.57
KRH45095	Soybean	nucleus	44.36	41.45
GSMUA_Achr11P...	Banana	nucleus	36.97	41.3
GSMUA_Achr8P12710_001	Banana	nucleus	36.97	41.13
Zm00001d048383_P001	Maize	nucleus	36.97	40.95
KRH01378	Soybean	nucleus	44.36	40.86
Os03t0142600-00	Rice	nucleus	38.91	40.49
GSMUA_Achr1P03450_001	Banana	nucleus	37.35	39.51
TraesCS4B01G344000.1	Wheat	nucleus	37.35	39.02
HORVU6Hr1G057670.3	Barley	nucleus	40.86	38.89
TraesCS5A01G512700.1	Wheat	nucleus	37.35	38.71
HORVU0Hr1G005100.1	Barley	nucleus	33.85	38.67
TraesCS2D01G361600.1	Wheat	nucleus	38.52	38.52
TraesCS4D01G339100.1	Wheat	nucleus	36.97	38.46
TraesCS2B01G381800.1	Wheat	nucleus	38.52	38.37
HORVU2Hr1G087990.1	Barley	nucleus	38.52	38.22
TraesCS2A01G363800.1	Wheat	nucleus	38.52	38.08
EER92876	Sorghum	nucleus	37.35	37.94
Bra015029.1-P	Field mustard	nucleus	39.69	37.64
TraesCS6B01G254200.1	Wheat	nucleus	40.08	37.59
Zm00001d027623_P001	Maize	nucleus	36.19	37.35
TraesCS6A01G227700.1	Wheat	nucleus	39.69	37.23
EES07157	Sorghum	nucleus	41.63	37.15
Zm00001d017243_P001	Maize	nucleus	40.47	37.01
Bra028369.1-P	Field mustard	nucleus	39.3	36.86
TraesCS6D01G207300.1	Wheat	nucleus	39.3	36.73
Os02t0618400-02	Rice	nucleus	40.86	36.33
HORVU4Hr1G084360.3	Barley	nucleus	37.74	36.06
Zm00001d025823_P001	Maize	nucleus	38.91	35.97
Bra001941.1-P	Field mustard	nucleus	38.13	35.77
KXG26684	Sorghum	nucleus	38.52	35.11
Bra001005.1-P	Field mustard	nucleus	28.02	34.62
Bra039108.1-P	Field mustard	nucleus	27.24	34.15
Os04t0508500-01	Rice	nucleus	36.97	33.81
Bra020289.1-P	Field mustard	nucleus	30.35	33.05
Bra006694.1-P	Field mustard	nucleus	30.74	32.64
Bra028550.1-P	Field mustard	nucleus	29.57	31.67
Bra002533.1-P	Field mustard	nucleus	29.18	31.65
Bra006977.1-P	Field mustard	nucleus	29.57	31.02
Zm00001d051117_P001	Maize	nucleus	33.46	30.82
Bra039067.1-P	Field mustard	nucleus	27.24	30.17
Bra018223.1-P	Field mustard	nucleus	29.57	30.16
Bra025300.1-P	Field mustard	nucleus	26.46	29.31
Bra004297.1-P	Field mustard	nucleus	30.74	27.82
Bra004041.1-P	Field mustard	nucleus	30.35	27.66
Bra004473.1-P	Field mustard	nucleus	28.79	26.91
Bra021389.1-P	Field mustard	nucleus	28.4	26.84
Bra012482.1-P	Field mustard	nucleus	29.57	26.76
Bra033948.1-P	Field mustard	nucleus	29.18	26.32
Bra001202.1-P	Field mustard	nucleus	31.13	26.32
Bra024760.1-P	Field mustard	nucleus	26.07	25.19
Bra020624.1-P	Field mustard	nucleus	30.74	24.84
Bra040274.1-P	Field mustard	nucleus	30.74	24.69
Bra029582.1-P	Field mustard	nucleus	30.35	24.22
Bra010022.1-P	Field mustard	nucleus	30.35	24.15
Bra010021.1-P	Field mustard	nucleus	30.35	24.15

Protein Annotations

EnsemblPlants:Bra020744.1	EnsemblPlants:Bra020744.1-P	EnsemblPlantsGene:Bra020744	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF572	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002545F6F	UniProt:M4DW50	MapMan:15.5.2.1	:	:

Description

AT3G30210 (E=3e-090) ATMYB121, MYB121 | MYB121 (MYB DOMAIN PROTEIN 121); DNA binding / transcription factor

Coordinates

chrA02:+:23340294..23343956

Molecular Weight (calculated)

29649.6 Da

IEP (calculated)

9.521

GRAVY (calculated)

-1.077

Length

257 amino acids

Sequence
(BLAST)

001: MLDLGADQVH QLTHDHDPYQ KQQQQLQGFR KGPWTPAEDK LLTEYVTSNG EGKWSSVAKC AGLNRSGKSC RLRWVNYLRP GLKRGQITPQ EEGIILELHF
101: LWGNKWSTIA RYLPGRTDNE IKNYWRTHYK KKDKSFSKQD KFKRSRKQLG MQPQPHNQRS QMVSRNHMNH DNEQNIASSF SYPTSVIHDQ FHMPQSVTAT
201: SSDHSMTDEG NLWGSLWSLN DEDRPHRFGG GWEQRIAADI SEKFNGDRIE APPCGSG

Best Arabidopsis Sequence Match ( AT3G30210.1 )
(BLAST)

001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF

Arabidopsis Description

ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.