Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00083 | Canola | nucleus | 75.36 | 77.04 |
| Bra036202.1-P | Field mustard | nucleus | 74.28 | 76.78 |
| CDY19978 | Canola | nucleus | 74.28 | 76.78 |
| CDX85285 | Canola | nucleus | 74.28 | 75.93 |
| Bra020744.1-P | Field mustard | nucleus | 69.93 | 75.1 |
| CDY45895 | Canola | nucleus | 69.93 | 75.1 |
| Bra025410.1-P | Field mustard | nucleus | 72.46 | 74.63 |
| CDX86354 | Canola | nucleus | 72.46 | 74.63 |
| CDY35782 | Canola | nucleus | 53.62 | 72.2 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 47.1 | 52.63 |
| PGSC0003DMT400003479 | Potato | nucleus | 44.57 | 51.68 |
| Solyc02g089190.1.1 | Tomato | nucleus | 44.57 | 51.46 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 33.33 | 45.1 |
| GSMUA_Achr11P... | Banana | nucleus | 34.78 | 45.07 |
| KRH01379 | Soybean | nucleus | 42.03 | 44.96 |
| KRH45095 | Soybean | nucleus | 42.39 | 42.55 |
| Zm00001d048383_P001 | Maize | nucleus | 35.14 | 41.81 |
| GSMUA_Achr11P... | Banana | nucleus | 34.78 | 41.74 |
| KRH01378 | Soybean | nucleus | 42.03 | 41.58 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 34.78 | 41.56 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 33.33 | 40.89 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 37.68 | 40.47 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 35.51 | 40.33 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 37.68 | 40.31 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 37.68 | 40.15 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 37.68 | 40.0 |
| Os03t0142600-00 | Rice | nucleus | 35.51 | 39.68 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 38.77 | 39.63 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 35.14 | 39.43 |
| AT3G24310.1 | Thale cress | nucleus | 38.41 | 39.41 |
| Zm00001d025823_P001 | Maize | nucleus | 39.49 | 39.21 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 35.14 | 39.11 |
| AT4G13480.1 | Thale cress | nucleus | 36.96 | 39.08 |
| Zm00001d027623_P001 | Maize | nucleus | 35.14 | 38.96 |
| EER92876 | Sorghum | nucleus | 35.51 | 38.74 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 38.41 | 38.69 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 38.04 | 38.32 |
| Os02t0618400-02 | Rice | nucleus | 39.86 | 38.06 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 34.06 | 38.06 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 37.68 | 37.82 |
| Zm00001d017243_P001 | Maize | nucleus | 38.41 | 37.72 |
| KXG26684 | Sorghum | nucleus | 38.41 | 37.59 |
| EES07157 | Sorghum | nucleus | 39.13 | 37.5 |
| Os04t0508500-01 | Rice | nucleus | 36.96 | 36.3 |
| AT5G59780.3 | Thale cress | nucleus | 30.07 | 35.32 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 34.42 | 35.32 |
| AT5G40350.1 | Thale cress | nucleus | 25.72 | 33.18 |
| AT3G01530.1 | Thale cress | nucleus | 24.64 | 33.01 |
| AT3G46130.1 | Thale cress | nucleus | 30.43 | 32.56 |
| AT3G53200.1 | Thale cress | nucleus | 27.54 | 31.93 |
| AT3G27810.1 | Thale cress | nucleus | 26.09 | 31.86 |
| Zm00001d051117_P001 | Maize | nucleus | 31.52 | 31.18 |
| AT1G48000.1 | Thale cress | nucleus | 26.81 | 30.45 |
| AT1G68320.1 | Thale cress | nucleus | 29.71 | 28.67 |
| AT2G47190.1 | Thale cress | nucleus | 27.17 | 27.47 |
| AT5G49620.2 | Thale cress | nucleus | 29.35 | 25.23 |
| AT3G06490.1 | Thale cress | nucleus | 29.35 | 25.08 |
| AT1G25340.3 | Thale cress | nucleus | 27.17 | 24.35 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:822714 | ProteinID:AEE77622.1 | EMBL:AF371980 | ArrayExpress:AT3G30210 |
| EnsemblPlantsGene:AT3G30210 | RefSeq:AT3G30210 | TAIR:AT3G30210 | RefSeq:AT3G30210-TAIR-G | EnsemblPlants:AT3G30210.1 | TAIR:AT3G30210.1 |
| Symbol:ATMYB121 | EMBL:AY519593 | Unigene:At.6642 | ProteinID:BAB02107.1 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_189640.1 |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF572 | UniProt:Q9LRU5 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A94AD | SEG:seg | : | : |
Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
Coordinates
chr3:+:11838363..11840502
Molecular Weight (calculated)
31371.3 Da
IEP (calculated)
6.886
GRAVY (calculated)
-0.976
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.