Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G361600.1 | Wheat | nucleus | 94.98 | 95.72 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 94.98 | 95.35 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 94.21 | 93.85 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 78.76 | 90.67 |
| KRH62917 | Soybean | nucleus | 27.41 | 68.27 |
| KRH33348 | Soybean | nucleus | 26.64 | 67.65 |
| KRH55348 | Soybean | nucleus | 32.05 | 66.94 |
| KRH11843 | Soybean | nucleus | 31.66 | 66.13 |
| KRH75688 | Soybean | nucleus | 26.64 | 63.89 |
| KXG26684 | Sorghum | nucleus | 67.95 | 62.41 |
| Zm00001d025823_P001 | Maize | nucleus | 66.41 | 61.87 |
| Os04t0508500-01 | Rice | nucleus | 66.41 | 61.21 |
| GSMUA_Achr11P... | Banana | nucleus | 49.03 | 59.62 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 58.69 | 56.3 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 50.19 | 56.28 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 43.63 | 55.39 |
| GSMUA_Achr11P... | Banana | nucleus | 48.65 | 54.78 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 49.03 | 52.26 |
| PGSC0003DMT400069955 | Potato | nucleus | 40.15 | 45.41 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 44.4 | 44.92 |
| Solyc05g053150.1.1 | Tomato | nucleus | 39.38 | 44.54 |
| KRG92245 | Soybean | nucleus | 43.24 | 44.09 |
| KRG90311 | Soybean | nucleus | 44.02 | 43.85 |
| CDX77436 | Canola | nucleus | 43.63 | 43.46 |
| Solyc09g090790.2.1 | Tomato | nucleus | 42.08 | 43.43 |
| Solyc02g089190.1.1 | Tomato | nucleus | 39.77 | 43.1 |
| KRH34553 | Soybean | nucleus | 44.02 | 42.86 |
| PGSC0003DMT400003796 | Potato | nucleus | 41.7 | 42.69 |
| KRH04452 | Soybean | nucleus | 43.63 | 42.64 |
| CDY49231 | Canola | nucleus | 44.02 | 42.54 |
| CDY61190 | Canola | nucleus | 42.86 | 42.53 |
| AT3G24310.1 | Thale cress | nucleus | 44.02 | 42.38 |
| CDX94829 | Canola | nucleus | 44.4 | 42.12 |
| Bra015029.1-P | Field mustard | nucleus | 44.02 | 42.07 |
| VIT_14s0083g01060.t01 | Wine grape | nucleus | 39.77 | 41.7 |
| Bra001941.1-P | Field mustard | nucleus | 44.02 | 41.61 |
| CDX93006 | Canola | nucleus | 44.02 | 41.61 |
| PGSC0003DMT400003479 | Potato | nucleus | 38.22 | 41.6 |
| AT4G13480.1 | Thale cress | nucleus | 40.93 | 40.61 |
| Bra028369.1-P | Field mustard | nucleus | 42.86 | 40.51 |
| CDY64694 | Canola | nucleus | 42.86 | 40.51 |
| CDY19978 | Canola | nucleus | 40.54 | 39.33 |
| Bra036202.1-P | Field mustard | nucleus | 40.54 | 39.33 |
| CDY00083 | Canola | nucleus | 40.93 | 39.26 |
| Bra025410.1-P | Field mustard | nucleus | 40.54 | 39.18 |
| CDX86354 | Canola | nucleus | 40.54 | 39.18 |
| Bra020744.1-P | Field mustard | nucleus | 38.22 | 38.52 |
| CDY45895 | Canola | nucleus | 38.22 | 38.52 |
| CDX85285 | Canola | nucleus | 40.15 | 38.52 |
| KRH01379 | Soybean | nucleus | 38.22 | 38.37 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 39.77 | 38.29 |
| AT3G30210.1 | Thale cress | nucleus | 40.15 | 37.68 |
| KRH33568 | Soybean | nucleus | 44.02 | 35.62 |
| KRH45095 | Soybean | nucleus | 36.68 | 34.55 |
| KRH01378 | Soybean | nucleus | 37.07 | 34.41 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 30.12 | 32.91 |
| CDY35782 | Canola | nucleus | 24.71 | 31.22 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 25.48 | 31.13 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 27.41 | 27.52 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 29.34 | 26.95 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 29.73 | 26.28 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 32.43 | 25.85 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 32.82 | 25.68 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 28.57 | 25.26 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 30.89 | 22.79 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 31.27 | 21.95 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 28.96 | 20.66 |
| HORVU5Hr1G022710.1 | Barley | cytosol, nucleus | 2.32 | 8.7 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A287ITU0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:HORVU2Hr1G087990 | EnsemblPlants:HORVU2Hr1G087990.1 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000B468D60 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:631284399..631287474
Molecular Weight (calculated)
28774.7 Da
IEP (calculated)
6.237
GRAVY (calculated)
-0.716
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAEGQLAA CWGKQDDEWR KGPWTTQEDK LLLDHVAQHG EGRWNSVSKL TGLKRSGKSC RLRWVNYLRP DLKRGKMTPQ EESTIVQLHS LWGNRWSTIA
101: RSLPGRTDNE IKNYWRTHYK KGKPSKNIER ARARFLMQRR EMQQQQQELL LGQAKDVDLA GGATVGDDVD EKMVGAIGPA ATTLADHGHE ELIMQDVLDF
201: LCPMSCALLH SAGHGQSGSC GASTSDEYGS TEDDGATWGS LWNLEDVAHD GDGGACALW
101: RSLPGRTDNE IKNYWRTHYK KGKPSKNIER ARARFLMQRR EMQQQQQELL LGQAKDVDLA GGATVGDDVD EKMVGAIGPA ATTLADHGHE ELIMQDVLDF
201: LCPMSCALLH SAGHGQSGSC GASTSDEYGS TEDDGATWGS LWNLEDVAHD GDGGACALW
001: MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
101: YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ
201: GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK PYFHNLVIPF C
Arabidopsis Description
AtMYB79Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.