Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77436 | Canola | nucleus | 90.3 | 93.08 |
| AT3G24310.1 | Thale cress | nucleus | 86.19 | 85.87 |
| CDY64694 | Canola | nucleus | 87.69 | 85.77 |
| CDY61190 | Canola | nucleus | 82.46 | 84.67 |
| CDX93006 | Canola | nucleus | 86.57 | 84.67 |
| KRH62917 | Soybean | nucleus | 32.84 | 84.62 |
| CDX94829 | Canola | nucleus | 85.45 | 83.88 |
| KRH55348 | Soybean | nucleus | 38.06 | 82.26 |
| KRH11843 | Soybean | nucleus | 37.69 | 81.45 |
| KRH33348 | Soybean | nucleus | 30.97 | 81.37 |
| KRH75688 | Soybean | nucleus | 31.34 | 77.78 |
| PGSC0003DMT400069955 | Potato | nucleus | 52.24 | 61.14 |
| Solyc05g053150.1.1 | Tomato | nucleus | 50.75 | 59.39 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 54.85 | 57.42 |
| KRG90311 | Soybean | nucleus | 55.6 | 57.31 |
| KRH34553 | Soybean | nucleus | 56.72 | 57.14 |
| KRG92245 | Soybean | nucleus | 54.1 | 57.09 |
| PGSC0003DMT400003796 | Potato | nucleus | 53.36 | 56.52 |
| KRH04452 | Soybean | nucleus | 55.6 | 56.23 |
| Solyc09g090790.2.1 | Tomato | nucleus | 52.61 | 56.18 |
| CDY58599 | Canola | nucleus | 20.9 | 52.83 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 39.55 | 51.96 |
| GSMUA_Achr11P... | Banana | nucleus | 40.67 | 51.17 |
| GSMUA_Achr11P... | Banana | nucleus | 42.54 | 49.57 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 41.04 | 47.62 |
| KRH33568 | Soybean | nucleus | 56.72 | 47.5 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 41.79 | 46.09 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 37.69 | 44.89 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 44.78 | 44.44 |
| Zm00001d048383_P001 | Maize | nucleus | 38.43 | 44.4 |
| KXG26684 | Sorghum | nucleus | 46.64 | 44.33 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 42.54 | 44.19 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 42.54 | 44.02 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 42.16 | 43.97 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 42.54 | 43.85 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 44.78 | 43.8 |
| Zm00001d017243_P001 | Maize | nucleus | 45.9 | 43.77 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 39.55 | 43.09 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 44.03 | 43.07 |
| Os03t0142600-00 | Rice | nucleus | 39.55 | 42.91 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 44.03 | 42.91 |
| EES07157 | Sorghum | nucleus | 45.9 | 42.71 |
| Zm00001d027623_P001 | Maize | nucleus | 39.55 | 42.57 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 39.18 | 42.51 |
| Zm00001d025823_P001 | Maize | nucleus | 44.03 | 42.45 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 39.18 | 42.34 |
| Os02t0618400-02 | Rice | nucleus | 45.52 | 42.21 |
| Os04t0508500-01 | Rice | nucleus | 44.03 | 41.99 |
| EER92876 | Sorghum | nucleus | 39.55 | 41.9 |
| CDX85422 | Canola | nucleus | 27.99 | 40.98 |
| CDY19978 | Canola | nucleus | 40.67 | 40.82 |
| CDY00083 | Canola | nucleus | 41.04 | 40.74 |
| CDX86354 | Canola | nucleus | 40.67 | 40.67 |
| CDX85285 | Canola | nucleus | 40.67 | 40.37 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 39.93 | 39.78 |
| CDY45895 | Canola | nucleus | 37.69 | 39.3 |
| CDX86220 | Canola | nucleus | 27.99 | 38.86 |
| CDY00146 | Canola | nucleus | 23.88 | 38.55 |
| CDY37512 | Canola | nucleus | 28.36 | 37.81 |
| CDY49063 | Canola | nucleus | 28.36 | 36.72 |
| Zm00001d051117_P001 | Maize | nucleus | 38.06 | 36.56 |
| CDX91944 | Canola | nucleus | 27.99 | 36.23 |
| CDX74303 | Canola | nucleus | 27.61 | 35.58 |
| CDX86471 | Canola | nucleus | 29.85 | 34.48 |
| CDY20036 | Canola | nucleus | 29.85 | 34.48 |
| CDY44433 | Canola | nucleus | 29.85 | 34.48 |
| CDX88722 | Canola | nucleus | 30.6 | 33.88 |
| CDX71075 | Canola | nucleus | 30.22 | 33.61 |
| CDY70097 | Canola | nucleus | 29.48 | 33.47 |
| CDX95420 | Canola | nucleus | 28.73 | 33.19 |
| CDY49581 | Canola | nucleus | 29.1 | 32.91 |
| CDX80230 | Canola | nucleus | 28.73 | 32.49 |
| CDX78153 | Canola | nucleus | 29.48 | 32.24 |
| CDX67561 | Canola | nucleus | 28.73 | 32.08 |
| CDX73572 | Canola | nucleus | 29.1 | 31.84 |
| CDY69488 | Canola | nucleus | 32.84 | 31.77 |
| CDY35782 | Canola | nucleus | 24.25 | 31.71 |
| CDY69953 | Canola | nucleus | 32.84 | 31.21 |
| CDY13311 | Canola | nucleus | 28.36 | 31.15 |
| CDX96033 | Canola | nucleus | 32.09 | 30.28 |
| CDY03859 | Canola | nucleus | 32.09 | 29.97 |
| CDY42115 | Canola | nucleus | 30.97 | 29.96 |
| CDY01906 | Canola | nucleus | 31.72 | 29.82 |
| CDY27504 | Canola | nucleus | 30.22 | 29.78 |
| CDX84981 | Canola | nucleus | 31.72 | 29.51 |
| CDY12705 | Canola | nucleus | 31.34 | 29.47 |
| CDY54094 | Canola | nucleus | 31.34 | 29.47 |
| CDX86040 | Canola | nucleus | 29.48 | 28.42 |
| CDX86041 | Canola | nucleus | 29.48 | 28.42 |
| CDX99125 | Canola | nucleus | 29.48 | 28.42 |
| CDX80085 | Canola | nucleus | 20.52 | 27.64 |
| CDY24688 | Canola | nucleus | 32.46 | 27.27 |
| CDX99864 | Canola | nucleus | 32.46 | 27.19 |
| CDY34949 | Canola | nucleus | 32.46 | 27.19 |
| CDY05611 | Canola | nucleus | 32.09 | 27.04 |
| CDY33891 | Canola | nucleus | 32.09 | 27.04 |
| CDY05270 | Canola | nucleus | 32.46 | 27.02 |
| CDY70282 | Canola | nucleus | 24.25 | 22.11 |
| CDX74100 | Canola | nucleus | 23.88 | 18.99 |
| CDY58600 | Canola | nucleus | 18.28 | 15.17 |
| CDX86221 | Canola | nucleus | 1.12 | 4.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078IGU5 | UniProt:A0A078IGU5 | EnsemblPlants:CDY49231 | ProteinID:CDY49231 |
| ProteinID:CDY49231.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00092614001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF574 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE3CD9 | SEG:seg |
Description
BnaC07g08510DBnaC07g08510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGU5]
Coordinates
chrLK032819:+:48633..49708
Molecular Weight (calculated)
30700.2 Da
IEP (calculated)
9.385
GRAVY (calculated)
-0.794
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLWGVMGAG WGMVEEGWRK GPWTAEEDRL LIDYVRLHGE GRWNSVAKLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKFPTNNAE KTKNRILKRQ QFRQLRQMEL QQEQQTLQFN QIDMKKIMSL IEDDNNNDNN FSSSSSGSSG EGGAFYVPHQ
201: IPHSTTSSGY DPNGNGFFPV PIPEANVNED YTVWDGLWNL DVEGQGSFGG GACVPRKHCF PNVSIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKFPTNNAE KTKNRILKRQ QFRQLRQMEL QQEQQTLQFN QIDMKKIMSL IEDDNNNDNN FSSSSSGSSG EGGAFYVPHQ
201: IPHSTTSSGY DPNGNGFFPV PIPEANVNED YTVWDGLWNL DVEGQGSFGG GACVPRKHCF PNVSIPFC
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.