Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra001005.1-P | Field mustard | nucleus | 100.0 | 100.0 |
CDX91944 | Canola | nucleus | 94.23 | 94.69 |
CDY37512 | Canola | nucleus | 81.25 | 84.08 |
CDY49063 | Canola | nucleus | 81.73 | 82.13 |
AT3G01530.1 | Thale cress | nucleus | 77.4 | 78.16 |
CDY58599 | Canola | nucleus | 26.92 | 52.83 |
GSMUA_Achr1P27270_001 | Banana | nucleus | 44.23 | 46.94 |
GSMUA_Achr6P27290_001 | Banana | nucleus | 43.75 | 46.67 |
CDY00146 | Canola | nucleus | 35.58 | 44.58 |
CDX85422 | Canola | nucleus | 38.46 | 43.72 |
CDY20036 | Canola | nucleus | 47.12 | 42.24 |
CDY44433 | Canola | nucleus | 47.12 | 42.24 |
CDX86471 | Canola | nucleus | 47.12 | 42.24 |
CDX86220 | Canola | nucleus | 38.46 | 41.45 |
TraesCS1D01G415000.1 | Wheat | nucleus | 45.19 | 41.23 |
TraesCS1A01G406600.1 | Wheat | mitochondrion | 45.67 | 38.15 |
HORVU3Hr1G056980.1 | Barley | nucleus | 37.98 | 37.26 |
TraesCS3A01G229500.1 | Wheat | nucleus | 37.5 | 37.14 |
TraesCS3B01G258800.1 | Wheat | nucleus | 37.5 | 36.62 |
TraesCS3D01G223700.1 | Wheat | nucleus | 37.5 | 36.45 |
TraesCS1B01G436800.1 | Wheat | nucleus | 32.21 | 35.45 |
CDX95420 | Canola | nucleus | 38.94 | 34.91 |
HORVU1Hr1G089770.2 | Barley | nucleus | 45.19 | 32.08 |
Zm00001d044107_P001 | Maize | nucleus | 40.38 | 31.82 |
CDY27504 | Canola | nucleus | 40.87 | 31.25 |
Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 41.35 | 30.94 |
CDY42115 | Canola | nucleus | 40.87 | 30.69 |
CDY70097 | Canola | nucleus | 34.62 | 30.51 |
CDY69488 | Canola | nucleus | 40.38 | 30.32 |
CDX71075 | Canola | nucleus | 35.1 | 30.29 |
CDY69953 | Canola | nucleus | 40.87 | 30.14 |
CDY49581 | Canola | nucleus | 34.13 | 29.96 |
CDX84981 | Canola | nucleus | 41.35 | 29.86 |
CDY03859 | Canola | nucleus | 40.87 | 29.62 |
CDX80230 | Canola | nucleus | 33.65 | 29.54 |
CDY12705 | Canola | nucleus | 40.38 | 29.47 |
CDX88722 | Canola | nucleus | 34.13 | 29.34 |
CDY24688 | Canola | nucleus | 44.71 | 29.15 |
CDY01906 | Canola | nucleus | 39.9 | 29.12 |
CDY05270 | Canola | nucleus | 44.71 | 28.88 |
CDX96033 | Canola | nucleus | 39.42 | 28.87 |
CDY54094 | Canola | nucleus | 39.42 | 28.77 |
CDX86354 | Canola | nucleus | 37.02 | 28.73 |
CDY05611 | Canola | nucleus | 43.75 | 28.62 |
CDY33891 | Canola | nucleus | 43.75 | 28.62 |
CDX77436 | Canola | nucleus | 35.58 | 28.46 |
EES01143 | Sorghum | nucleus | 39.9 | 28.33 |
CDX85285 | Canola | nucleus | 36.54 | 28.15 |
CDY45895 | Canola | nucleus | 34.62 | 28.02 |
CDY61190 | Canola | nucleus | 35.1 | 27.97 |
CDY34949 | Canola | nucleus | 42.79 | 27.81 |
CDX99864 | Canola | nucleus | 42.79 | 27.81 |
CDX80085 | Canola | nucleus | 26.44 | 27.64 |
CDY49231 | Canola | nucleus | 35.58 | 27.61 |
CDX86041 | Canola | nucleus | 36.54 | 27.34 |
CDX99125 | Canola | nucleus | 36.54 | 27.34 |
CDX93006 | Canola | nucleus | 35.58 | 27.01 |
CDX86040 | Canola | nucleus | 36.06 | 26.98 |
CDX94829 | Canola | nucleus | 35.1 | 26.74 |
CDX67561 | Canola | nucleus | 30.77 | 26.67 |
CDY00083 | Canola | nucleus | 34.62 | 26.67 |
CDY64694 | Canola | nucleus | 35.1 | 26.64 |
CDY19978 | Canola | nucleus | 34.13 | 26.59 |
CDX73572 | Canola | nucleus | 31.25 | 26.53 |
CDX78153 | Canola | nucleus | 31.25 | 26.53 |
CDY13311 | Canola | nucleus | 30.77 | 26.23 |
CDY70282 | Canola | nucleus | 34.62 | 24.49 |
CDY35782 | Canola | nucleus | 19.71 | 20.0 |
CDX74100 | Canola | nucleus | 32.21 | 19.88 |
CDX86221 | Canola | nucleus | 4.81 | 14.29 |
CDY58600 | Canola | nucleus | 21.15 | 13.62 |
GSMUA_Achr9P07000_001 | Banana | nucleus | 42.79 | 7.08 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078CH36 | EnsemblPlants:CDX74303 | ProteinID:CDX74303 | ProteinID:CDX74303.1 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00112096001 | InterPro:Homeobox-like_sf |
InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF688 |
InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00025407EB | : | : |
Description
BnaA03g27440D
Coordinates
chrLK031800:-:2127397..2128303
Molecular Weight (calculated)
23941.5 Da
IEP (calculated)
10.107
GRAVY (calculated)
-0.841
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKTGRSGKE RITSQKEEEG TVRKGPWTME EDLILFNYIL NHGEGLWNSV AKASGLKRTG KSCRLRWLNY LRPDVRRGNI TAEEQLLIIQ LQAKLGNKWS
101: KIAKHLPGRT DNEIKNFWRT KIQRHMKLSS SKTMNSRHCL GSSQSSVMTT TDQGSSSKAS HMAESLKSTE TMTTSYNVME QCNDSYWSVE DLWPVQLFND
201: DHHQHQLL
101: KIAKHLPGRT DNEIKNFWRT KIQRHMKLSS SKTMNSRHCL GSSQSSVMTT TDQGSSSKAS HMAESLKSTE TMTTSYNVME QCNDSYWSVE DLWPVQLFND
201: DHHQHQLL
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.