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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001005.1-P Field mustard nucleus 100.0 100.0
CDX91944 Canola nucleus 94.23 94.69
CDY37512 Canola nucleus 81.25 84.08
CDY49063 Canola nucleus 81.73 82.13
AT3G01530.1 Thale cress nucleus 77.4 78.16
CDY58599 Canola nucleus 26.92 52.83
GSMUA_Achr1P27270_001 Banana nucleus 44.23 46.94
GSMUA_Achr6P27290_001 Banana nucleus 43.75 46.67
CDY00146 Canola nucleus 35.58 44.58
CDX85422 Canola nucleus 38.46 43.72
CDY20036 Canola nucleus 47.12 42.24
CDY44433 Canola nucleus 47.12 42.24
CDX86471 Canola nucleus 47.12 42.24
CDX86220 Canola nucleus 38.46 41.45
TraesCS1D01G415000.1 Wheat nucleus 45.19 41.23
TraesCS1A01G406600.1 Wheat mitochondrion 45.67 38.15
HORVU3Hr1G056980.1 Barley nucleus 37.98 37.26
TraesCS3A01G229500.1 Wheat nucleus 37.5 37.14
TraesCS3B01G258800.1 Wheat nucleus 37.5 36.62
TraesCS3D01G223700.1 Wheat nucleus 37.5 36.45
TraesCS1B01G436800.1 Wheat nucleus 32.21 35.45
CDX95420 Canola nucleus 38.94 34.91
HORVU1Hr1G089770.2 Barley nucleus 45.19 32.08
Zm00001d044107_P001 Maize nucleus 40.38 31.82
CDY27504 Canola nucleus 40.87 31.25
Os01t0637800-00 Rice mitochondrion, nucleus, plastid 41.35 30.94
CDY42115 Canola nucleus 40.87 30.69
CDY70097 Canola nucleus 34.62 30.51
CDY69488 Canola nucleus 40.38 30.32
CDX71075 Canola nucleus 35.1 30.29
CDY69953 Canola nucleus 40.87 30.14
CDY49581 Canola nucleus 34.13 29.96
CDX84981 Canola nucleus 41.35 29.86
CDY03859 Canola nucleus 40.87 29.62
CDX80230 Canola nucleus 33.65 29.54
CDY12705 Canola nucleus 40.38 29.47
CDX88722 Canola nucleus 34.13 29.34
CDY24688 Canola nucleus 44.71 29.15
CDY01906 Canola nucleus 39.9 29.12
CDY05270 Canola nucleus 44.71 28.88
CDX96033 Canola nucleus 39.42 28.87
CDY54094 Canola nucleus 39.42 28.77
CDX86354 Canola nucleus 37.02 28.73
CDY05611 Canola nucleus 43.75 28.62
CDY33891 Canola nucleus 43.75 28.62
CDX77436 Canola nucleus 35.58 28.46
EES01143 Sorghum nucleus 39.9 28.33
CDX85285 Canola nucleus 36.54 28.15
CDY45895 Canola nucleus 34.62 28.02
CDY61190 Canola nucleus 35.1 27.97
CDY34949 Canola nucleus 42.79 27.81
CDX99864 Canola nucleus 42.79 27.81
CDX80085 Canola nucleus 26.44 27.64
CDY49231 Canola nucleus 35.58 27.61
CDX86041 Canola nucleus 36.54 27.34
CDX99125 Canola nucleus 36.54 27.34
CDX93006 Canola nucleus 35.58 27.01
CDX86040 Canola nucleus 36.06 26.98
CDX94829 Canola nucleus 35.1 26.74
CDX67561 Canola nucleus 30.77 26.67
CDY00083 Canola nucleus 34.62 26.67
CDY64694 Canola nucleus 35.1 26.64
CDY19978 Canola nucleus 34.13 26.59
CDX73572 Canola nucleus 31.25 26.53
CDX78153 Canola nucleus 31.25 26.53
CDY13311 Canola nucleus 30.77 26.23
CDY70282 Canola nucleus 34.62 24.49
CDY35782 Canola nucleus 19.71 20.0
CDX74100 Canola nucleus 32.21 19.88
CDX86221 Canola nucleus 4.81 14.29
CDY58600 Canola nucleus 21.15 13.62
GSMUA_Achr9P07000_001 Banana nucleus 42.79 7.08
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1GO:A0A078CH36EnsemblPlants:CDX74303ProteinID:CDX74303ProteinID:CDX74303.1
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488EnsemblPlantsGene:GSBRNA2T00112096001InterPro:Homeobox-like_sf
InterPro:IPR017930InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF688
InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689UniParc:UPI00025407EB::
Description
BnaA03g27440D
Coordinates
chrLK031800:-:2127397..2128303
Molecular Weight (calculated)
23941.5 Da
IEP (calculated)
10.107
GRAVY (calculated)
-0.841
Length
208 amino acids
Sequence
(BLAST)
001: MKKTGRSGKE RITSQKEEEG TVRKGPWTME EDLILFNYIL NHGEGLWNSV AKASGLKRTG KSCRLRWLNY LRPDVRRGNI TAEEQLLIIQ LQAKLGNKWS
101: KIAKHLPGRT DNEIKNFWRT KIQRHMKLSS SKTMNSRHCL GSSQSSVMTT TDQGSSSKAS HMAESLKSTE TMTTSYNVME QCNDSYWSVE DLWPVQLFND
201: DHHQHQLL
Best Arabidopsis Sequence Match ( AT3G01530.1 )
(BLAST)
001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI
Arabidopsis Description
MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.