Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12705 | Canola | nucleus | 96.14 | 96.14 |
| CDY69488 | Canola | nucleus | 82.81 | 85.2 |
| CDY69953 | Canola | nucleus | 84.21 | 85.11 |
| CDY01906 | Canola | nucleus | 83.51 | 83.51 |
| CDX96033 | Canola | nucleus | 82.81 | 83.1 |
| AT1G68320.1 | Thale cress | nucleus | 81.75 | 81.47 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 31.93 | 73.39 |
| CDY58599 | Canola | nucleus | 24.21 | 65.09 |
| CDY42115 | Canola | nucleus | 56.14 | 57.76 |
| CDY03859 | Canola | nucleus | 57.89 | 57.49 |
| GSMUA_Achr10P... | Banana | nucleus | 34.74 | 56.57 |
| CDX84981 | Canola | nucleus | 56.84 | 56.25 |
| CDX85422 | Canola | nucleus | 35.09 | 54.64 |
| CDX86220 | Canola | nucleus | 35.09 | 51.81 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.39 | 50.26 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 40.7 | 46.59 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 44.91 | 44.44 |
| Solyc03g119370.1.1 | Tomato | nucleus | 42.11 | 42.86 |
| CDY37512 | Canola | nucleus | 30.18 | 42.79 |
| CDY00146 | Canola | nucleus | 24.56 | 42.17 |
| PGSC0003DMT400014383 | Potato | nucleus | 41.05 | 42.09 |
| KRG90844 | Soybean | nucleus | 45.26 | 42.02 |
| CDY49063 | Canola | nucleus | 30.18 | 41.55 |
| KRH35934 | Soybean | nucleus | 44.56 | 41.23 |
| CDX95420 | Canola | nucleus | 32.98 | 40.52 |
| CDX91944 | Canola | nucleus | 29.12 | 40.1 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 42.11 | 39.6 |
| CDX74303 | Canola | nucleus | 28.77 | 39.42 |
| CDY20036 | Canola | nucleus | 31.93 | 39.22 |
| CDY44433 | Canola | nucleus | 31.93 | 39.22 |
| CDX86471 | Canola | nucleus | 31.93 | 39.22 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.0 | 39.04 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 40.0 | 37.01 |
| CDY27504 | Canola | nucleus | 35.09 | 36.76 |
| GSMUA_Achr11P... | Banana | nucleus | 40.35 | 36.51 |
| Os01t0128000-01 | Rice | nucleus | 42.81 | 34.86 |
| CDX80085 | Canola | nucleus | 24.21 | 34.67 |
| Zm00001d040019_P001 | Maize | nucleus | 43.86 | 34.53 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 41.4 | 34.3 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 41.4 | 34.1 |
| CDY58600 | Canola | nucleus | 38.6 | 34.06 |
| Zm00001d008528_P001 | Maize | nucleus | 42.81 | 33.7 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 41.4 | 33.62 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 41.4 | 33.62 |
| CDY33891 | Canola | nucleus | 37.19 | 33.33 |
| CDY05611 | Canola | nucleus | 37.19 | 33.33 |
| CDY70097 | Canola | nucleus | 27.37 | 33.05 |
| CDY49581 | Canola | nucleus | 27.37 | 32.91 |
| CDY24688 | Canola | nucleus | 36.49 | 32.6 |
| CDX80230 | Canola | nucleus | 27.02 | 32.49 |
| CDX77436 | Canola | nucleus | 29.47 | 32.31 |
| CDY05270 | Canola | nucleus | 36.49 | 32.3 |
| CDX99864 | Canola | nucleus | 36.14 | 32.19 |
| CDY34949 | Canola | nucleus | 36.14 | 32.19 |
| CDX71075 | Canola | nucleus | 27.02 | 31.95 |
| CDX88722 | Canola | nucleus | 27.02 | 31.82 |
| CDY61190 | Canola | nucleus | 28.77 | 31.42 |
| EES00381 | Sorghum | nucleus | 42.81 | 31.36 |
| CDY49231 | Canola | nucleus | 29.47 | 31.34 |
| CDX94829 | Canola | nucleus | 29.82 | 31.14 |
| CDX93006 | Canola | nucleus | 29.82 | 31.02 |
| CDY64694 | Canola | nucleus | 29.12 | 30.29 |
| CDY45895 | Canola | nucleus | 26.67 | 29.57 |
| CDX99125 | Canola | nucleus | 28.07 | 28.78 |
| CDX86041 | Canola | nucleus | 28.07 | 28.78 |
| CDX86354 | Canola | nucleus | 27.02 | 28.73 |
| CDY70282 | Canola | nucleus | 29.47 | 28.57 |
| CDX85285 | Canola | nucleus | 27.02 | 28.52 |
| CDX86040 | Canola | nucleus | 27.72 | 28.42 |
| CDY00083 | Canola | nucleus | 25.96 | 27.41 |
| CDY19978 | Canola | nucleus | 25.61 | 27.34 |
| CDX73572 | Canola | nucleus | 23.16 | 26.94 |
| CDY13311 | Canola | nucleus | 22.81 | 26.64 |
| CDX78153 | Canola | nucleus | 22.81 | 26.53 |
| CDX67561 | Canola | nucleus | 22.11 | 26.25 |
| CDX74100 | Canola | nucleus | 28.07 | 23.74 |
| CDY35782 | Canola | nucleus | 15.79 | 21.95 |
| CDX86221 | Canola | nucleus | 2.46 | 10.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078IXM2 | UniProt:A0A078IXM2 | EnsemblPlants:CDY54094 | ProteinID:CDY54094 |
| ProteinID:CDY54094.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00013352001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EDB60B | SEG:seg |
Description
BnaC02g46060DBnaC02g46060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXM2]
Coordinates
chrLK033276:-:45844..46897
Molecular Weight (calculated)
33086.7 Da
IEP (calculated)
6.052
GRAVY (calculated)
-0.881
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MENSMKKKTF TESEEVELRR GPWTLEEDTL LTNYIIQNSE GRWNLVAKCA GLKRTGKSCR LRWLNYLKPD IRRGKLSPQE QLMILDLHSK WGNRWSKIAQ
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDKFFDAVRS FWVPRLIEKM EQNPSNTYCC PQNNNNNNNS LLPPSQSYDS MSKQTYTDIS GKNLGISNTD
201: GSASSTTSMP DLMTVPHFMD HNTIIDSSMC YHEGNGQELG GYIPGMEEYY MRNSDISTDC HVAEAYEDVT QDPMWNVDDI WQFRG
101: YLPGRTDNEI KNYWRTRVQK QARQLNIESN SDKFFDAVRS FWVPRLIEKM EQNPSNTYCC PQNNNNNNNS LLPPSQSYDS MSKQTYTDIS GKNLGISNTD
201: GSASSTTSMP DLMTVPHFMD HNTIIDSSMC YHEGNGQELG GYIPGMEEYY MRNSDISTDC HVAEAYEDVT QDPMWNVDDI WQFRG
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.