Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P19990_001 | Banana | nucleus | 66.94 | 64.84 |
| GSMUA_Achr10P... | Banana | nucleus | 90.32 | 64.0 |
| CDY58599 | Canola | nucleus | 50.81 | 59.43 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 81.45 | 51.79 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 73.39 | 50.0 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 69.35 | 49.14 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 84.68 | 42.17 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 62.9 | 39.8 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 62.1 | 39.49 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 87.9 | 37.33 |
| Solyc05g009230.1.1 | Tomato | nucleus | 80.65 | 36.5 |
| PGSC0003DMT400037716 | Potato | nucleus | 79.84 | 36.26 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 87.9 | 35.97 |
| PGSC0003DMT400014383 | Potato | nucleus | 79.84 | 35.61 |
| GSMUA_Achr11P... | Banana | nucleus | 75.0 | 35.5 |
| Solyc03g119370.1.1 | Tomato | nucleus | 79.84 | 35.36 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 71.77 | 34.77 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 70.97 | 33.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 72.58 | 33.71 |
| Bra012482.1-P | Field mustard | nucleus | 76.61 | 33.45 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 54.84 | 33.33 |
| GSMUA_Achr11P... | Banana | nucleus | 70.97 | 33.33 |
| GSMUA_Achr11P... | Banana | nucleus | 84.68 | 33.33 |
| CDY69488 | Canola | nucleus | 74.19 | 33.21 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 82.26 | 33.12 |
| CDY03859 | Canola | nucleus | 76.61 | 33.1 |
| CDX96033 | Canola | nucleus | 75.81 | 33.1 |
| Bra004297.1-P | Field mustard | nucleus | 75.81 | 33.1 |
| CDY01906 | Canola | nucleus | 75.0 | 32.63 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 70.97 | 32.59 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 54.84 | 32.54 |
| AT1G68320.1 | Thale cress | nucleus | 75.0 | 32.52 |
| CDY42115 | Canola | nucleus | 72.58 | 32.49 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 70.16 | 32.34 |
| CDY69953 | Canola | nucleus | 73.39 | 32.27 |
| CDX84981 | Canola | nucleus | 74.19 | 31.94 |
| Bra033948.1-P | Field mustard | nucleus | 73.39 | 31.93 |
| CDY54094 | Canola | nucleus | 73.39 | 31.93 |
| CDY12705 | Canola | nucleus | 73.39 | 31.93 |
| Bra004041.1-P | Field mustard | nucleus | 72.58 | 31.91 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 52.42 | 31.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 71.77 | 31.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 70.16 | 31.64 |
| GSMUA_Achr10P... | Banana | nucleus | 54.03 | 31.6 |
| GSMUA_Achr11P... | Banana | nucleus | 54.03 | 31.46 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 83.06 | 31.4 |
| KRH41648 | Soybean | nucleus | 78.23 | 31.09 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 53.23 | 30.84 |
| KRH60346 | Soybean | nucleus | 78.23 | 30.6 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 84.68 | 30.52 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 66.94 | 30.51 |
| Bra024760.1-P | Field mustard | nucleus | 65.32 | 30.45 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 84.68 | 30.35 |
| Os01t0128000-01 | Rice | nucleus | 85.48 | 30.29 |
| KRH48497 | Soybean | nucleus | 75.81 | 30.23 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 69.35 | 29.97 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 57.26 | 29.96 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 84.68 | 29.91 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 84.68 | 29.91 |
| KRH39173 | Soybean | nucleus | 74.19 | 29.68 |
| GSMUA_Achr10P... | Banana | nucleus | 56.45 | 29.66 |
| GSMUA_Achr11P... | Banana | nucleus | 54.84 | 29.57 |
| Zm00001d040019_P001 | Maize | nucleus | 85.48 | 29.28 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 57.26 | 29.22 |
| GSMUA_Achr10P... | Banana | nucleus | 53.23 | 29.2 |
| Zm00001d008528_P001 | Maize | nucleus | 84.68 | 29.01 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 54.03 | 29.0 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 54.84 | 28.81 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 55.65 | 28.63 |
| GSMUA_Achr11P... | Banana | nucleus | 54.84 | 28.22 |
| AT1G25340.3 | Thale cress | nucleus | 69.35 | 27.92 |
| EES00381 | Sorghum | nucleus | 86.29 | 27.51 |
| GSMUA_Achr11P... | Banana | nucleus | 74.19 | 26.74 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 50.0 | 25.31 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 65.32 | 6.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P01370_001 | EnsemblPlants:GSMUA_Achr3T01370_001 | EnsemblPlantsGene:GSMUA_Achr3G01370_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000294BE90 | UniProt:M0SAV5 | MapMan:15.5.2.1 | : | : | : |
Description
Transcription factor MYB21 [Source:GMGC_GENE;Acc:GSMUA_Achr3G01370_001]
Coordinates
chr3:+:977749..979992
Molecular Weight (calculated)
14722.9 Da
IEP (calculated)
10.616
GRAVY (calculated)
-0.822
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MELRRGPWTL EEDKLLIHYI ACHGEGRWNL LARCSGLKRT GKSCRLRWLN YLKPDVKRGN LSPEEQLLIL ELHAKWGNRW SRIAQHLPGR TDNEIKNYWR
101: TRVQKQARQL KPPITSSFHC QIDP
101: TRVQKQARQL KPPITSSFHC QIDP
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.