Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 64.83 | 72.17 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 50.0 | 55.14 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 28.81 | 54.84 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 29.66 | 54.69 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 47.46 | 54.63 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 47.88 | 54.07 |
| GSMUA_Achr10P... | Banana | nucleus | 51.69 | 53.98 |
| GSMUA_Achr10P... | Banana | nucleus | 51.69 | 51.69 |
| PGSC0003DMT400040149 | Potato | nucleus | 47.03 | 50.92 |
| Solyc11g073120.1.1 | Tomato | nucleus | 46.61 | 50.69 |
| GSMUA_Achr11P... | Banana | nucleus | 50.0 | 48.96 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 49.15 | 48.95 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 49.58 | 47.76 |
| AT5G59780.3 | Thale cress | nucleus | 47.46 | 47.66 |
| Solyc06g005330.2.1 | Tomato | nucleus | 47.46 | 47.46 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 48.31 | 47.3 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 50.0 | 46.09 |
| Bra018223.1-P | Field mustard | nucleus | 49.15 | 46.03 |
| Bra002533.1-P | Field mustard | nucleus | 46.19 | 45.99 |
| CDY49581 | Canola | nucleus | 46.19 | 45.99 |
| Bra006694.1-P | Field mustard | nucleus | 47.03 | 45.87 |
| CDY70097 | Canola | nucleus | 45.76 | 45.76 |
| Bra020289.1-P | Field mustard | nucleus | 45.76 | 45.76 |
| CDX80230 | Canola | nucleus | 45.76 | 45.57 |
| KRH10298 | Soybean | nucleus | 49.15 | 45.49 |
| CDX71075 | Canola | nucleus | 46.19 | 45.23 |
| CDX88722 | Canola | nucleus | 46.19 | 45.04 |
| KRH23019 | Soybean | nucleus | 49.58 | 44.32 |
| AT3G46130.1 | Thale cress | nucleus | 47.46 | 43.41 |
| KRH29850 | Soybean | nucleus | 48.31 | 42.86 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 32.63 | 42.31 |
| KRH24842 | Soybean | nucleus | 47.03 | 41.73 |
| CDX86040 | Canola | nucleus | 49.15 | 41.73 |
| CDX86041 | Canola | nucleus | 49.15 | 41.73 |
| CDX99125 | Canola | nucleus | 49.15 | 41.73 |
| GSMUA_Achr10P... | Banana | nucleus | 29.66 | 40.0 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 29.24 | 39.43 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 31.78 | 38.46 |
| KXG29190 | Sorghum | nucleus | 33.47 | 37.26 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 30.51 | 36.92 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 31.36 | 36.27 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 28.81 | 34.69 |
| GSMUA_Achr11P... | Banana | nucleus | 33.05 | 33.91 |
| GSMUA_Achr11P... | Banana | nucleus | 29.66 | 32.86 |
| GSMUA_Achr11P... | Banana | nucleus | 35.17 | 31.44 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 33.47 | 30.86 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 30.08 | 30.74 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 31.36 | 30.45 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 34.75 | 30.37 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.32 | 30.34 |
| GSMUA_Achr11P... | Banana | nucleus | 33.47 | 30.15 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 31.78 | 30.12 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 31.78 | 28.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.32 | 28.83 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 32.63 | 28.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.2 | 27.64 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 31.36 | 27.51 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 33.9 | 25.97 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 31.36 | 25.78 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 33.05 | 25.74 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 31.78 | 25.68 |
| GSMUA_Achr11P... | Banana | nucleus | 33.47 | 25.08 |
| GSMUA_Achr11P... | Banana | nucleus | 32.2 | 22.09 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 35.17 | 6.6 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P02640_001 | EnsemblPlants:GSMUA_Achr8T02640_001 | EnsemblPlantsGene:GSMUA_Achr8G02640_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294E8CB | UniProt:M0TM16 | MapMan:15.5.2.1 | : | : |
Description
Myb-related protein MYBAS1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G02640_001]
Coordinates
chr8:+:1876740..1877680
Molecular Weight (calculated)
27119.7 Da
IEP (calculated)
4.960
GRAVY (calculated)
-0.806
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMVKEEMRR GPWTEQEDLQ LAWFAALFGE RRWDFIAKVS GLNRTGKSCR MRWVNYLHPS LKHGRMTPQE ECLILELHSR WGNRWSRIAR KLPGRTDNEI
101: KNYWRTHMRK RAQEEKRSFS PSRTTTSTSP ADDFPIGSEP RAEAAAGCQL SSSCMSLGLD EDSQGADWCS MDQAWNELAM PEAIDGRSFD DCRESTTTAW
201: PPSMPSPPMW ECCTASLWKT DEEEEEEELN GAAFGL
101: KNYWRTHMRK RAQEEKRSFS PSRTTTSTSP ADDFPIGSEP RAEAAAGCQL SSSCMSLGLD EDSQGADWCS MDQAWNELAM PEAIDGRSFD DCRESTTTAW
201: PPSMPSPPMW ECCTASLWKT DEEEEEEELN GAAFGL
001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF
Arabidopsis Description
ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.