Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g086690.2.1 | Tomato | nucleus | 38.27 | 79.79 |
| KRG94092 | Soybean | nucleus | 35.71 | 78.65 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 43.37 | 66.41 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 39.8 | 62.9 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 58.67 | 60.85 |
| Solyc02g067760.2.1 | Tomato | nucleus | 55.1 | 55.38 |
| PGSC0003DMT400001278 | Potato | nucleus | 56.63 | 53.62 |
| KRH07188 | Soybean | nucleus | 56.63 | 53.37 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 53.06 | 53.33 |
| KRG94086 | Soybean | nucleus | 55.61 | 52.91 |
| KRG93265 | Soybean | nucleus | 55.1 | 52.68 |
| KRH56587 | Soybean | nucleus | 55.1 | 52.43 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 47.96 | 51.65 |
| AT5G40350.1 | Thale cress | nucleus | 55.1 | 50.47 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 43.88 | 49.14 |
| AT3G27810.1 | Thale cress | nucleus | 56.12 | 48.67 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 56.12 | 48.25 |
| CDY20036 | Canola | nucleus | 56.63 | 47.84 |
| CDX86471 | Canola | nucleus | 56.63 | 47.84 |
| CDY44433 | Canola | nucleus | 56.63 | 47.84 |
| Bra039067.1-P | Field mustard | nucleus | 56.63 | 47.84 |
| Bra025300.1-P | Field mustard | nucleus | 56.63 | 47.84 |
| AT3G01530.1 | Thale cress | nucleus | 50.0 | 47.57 |
| CDY37512 | Canola | nucleus | 48.47 | 47.26 |
| CDY00146 | Canola | nucleus | 39.8 | 46.99 |
| CDY49063 | Canola | nucleus | 49.49 | 46.86 |
| Bra039108.1-P | Field mustard | nucleus | 47.96 | 45.85 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 58.16 | 45.78 |
| CDX91944 | Canola | nucleus | 47.96 | 45.41 |
| GSMUA_Achr10P... | Banana | nucleus | 39.8 | 44.57 |
| Bra001005.1-P | Field mustard | nucleus | 46.94 | 44.23 |
| CDX74303 | Canola | nucleus | 46.94 | 44.23 |
| HORVU3Hr1G056980.1 | Barley | nucleus | 45.41 | 41.98 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 40.31 | 41.8 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 44.9 | 41.12 |
| TraesCS3A01G229500.1 | Wheat | nucleus | 43.88 | 40.95 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 44.39 | 40.85 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 39.29 | 39.49 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 56.63 | 37.88 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 47.45 | 36.33 |
| GSMUA_Achr11P... | Banana | nucleus | 48.47 | 36.26 |
| GSMUA_Achr11P... | Banana | nucleus | 48.47 | 35.98 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 47.45 | 35.77 |
| GSMUA_Achr11P... | Banana | nucleus | 38.27 | 35.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.96 | 35.21 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 48.47 | 34.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.0 | 34.88 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 47.96 | 34.81 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 47.45 | 34.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.96 | 34.18 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 37.24 | 34.11 |
| Zm00001d044107_P001 | Maize | nucleus | 45.92 | 34.09 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 35.2 | 33.82 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 35.2 | 33.66 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 35.71 | 33.49 |
| GSMUA_Achr11P... | Banana | nucleus | 39.29 | 33.48 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 47.45 | 33.45 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 42.35 | 33.33 |
| EES01143 | Sorghum | nucleus | 48.98 | 32.76 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 47.96 | 32.75 |
| GSMUA_Achr10P... | Banana | nucleus | 37.76 | 32.74 |
| GSMUA_Achr10P... | Banana | nucleus | 35.2 | 32.55 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 37.76 | 32.03 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 38.27 | 31.65 |
| GSMUA_Achr10P... | Banana | nucleus | 37.24 | 30.93 |
| GSMUA_Achr11P... | Banana | nucleus | 37.76 | 30.71 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 37.24 | 30.04 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 36.73 | 29.88 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 36.73 | 29.39 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 43.37 | 29.11 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 34.69 | 28.81 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 43.88 | 27.92 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 42.86 | 27.72 |
| GSMUA_Achr11P... | Banana | nucleus | 41.84 | 26.03 |
| GSMUA_Achr11P... | Banana | nucleus | 45.41 | 25.87 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 69.9 | 10.9 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P27270_001 | EnsemblPlants:GSMUA_Achr1T27270_001 | EnsemblPlantsGene:GSMUA_Achr1G27270_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF531 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294ADCC | UniProt:M0S3I4 | MapMan:15.5.2.1 | : | : |
Description
Myb-related protein 305 [Source:GMGC_GENE;Acc:GSMUA_Achr1G27270_001]
Coordinates
chr1:-:23895527..23896760
Molecular Weight (calculated)
22592.3 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.926
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRISNSQE AEVRKGPWTM EEDLILINYI TNHGEGVWNN VARSAGLNRT GKSCRLRWLN YLRPDVRRGN ITPEEQHLIM ELHARWGNRW SKIARQLPGR
101: TDNEIKNFWR TRIQKKLKHG EPFGVQNVML TDEASTSTTQ VNTTTDEGAQ PGAYTHMHDE QQTANPDGMI SEFSTESSDN FWTVDDFWSM PSLNGD
101: TDNEIKNFWR TRIQKKLKHG EPFGVQNVML TDEASTSTTQ VNTTTDEGAQ PGAYTHMHDE QQTANPDGMI SEFSTESSDN FWTVDDFWSM PSLNGD
001: MEKRESSGGS GSGDAEVRKG PWTMEEDLIL INYIANHGEG VWNSLAKSAG LKRTGKSCRL RWLNYLRPDV RRGNITPEEQ LTIMELHAKW GNRWSKIAKH
101: LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW
201: SVDDLWPMNI YNGN
101: LPGRTDNEIK NFWRTKIQKY IIKSGETTTV GSQSSEFINH HATTSHVMND TQETMDMYSP TTSYQHASNI NQQLNYGNYV PESGSIMMPL SVDQSEQNYW
201: SVDDLWPMNI YNGN
Arabidopsis Description
MYB24Transcription factor MYB24 [Source:UniProtKB/Swiss-Prot;Acc:Q9SPG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.