Factsheet for Bra001005.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74303	Canola	nucleus	100.0	100.0
Bra039108.1-P	Field mustard	nucleus	80.77	81.95
AT3G01530.1	Thale cress	nucleus	77.4	78.16
GSMUA_Achr1P27270_001	Banana	nucleus	44.23	46.94
GSMUA_Achr6P27290_001	Banana	nucleus	43.75	46.67
Bra039067.1-P	Field mustard	nucleus	47.12	42.24
Bra025300.1-P	Field mustard	nucleus	47.12	42.24
TraesCS1D01G415000.1	Wheat	nucleus	45.19	41.23
TraesCS1A01G406600.1	Wheat	mitochondrion	45.67	38.15
HORVU3Hr1G056980.1	Barley	nucleus	37.98	37.26
TraesCS3A01G229500.1	Wheat	nucleus	37.5	37.14
TraesCS3B01G258800.1	Wheat	nucleus	37.5	36.62
TraesCS3D01G223700.1	Wheat	nucleus	37.5	36.45
TraesCS1B01G436800.1	Wheat	nucleus	32.21	35.45
HORVU1Hr1G089770.2	Barley	nucleus	45.19	32.08
Zm00001d044107_P001	Maize	nucleus	40.38	31.82
Bra004473.1-P	Field mustard	nucleus	41.83	31.64
Bra021389.1-P	Field mustard	nucleus	40.87	31.25
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	41.35	30.94
Bra020289.1-P	Field mustard	nucleus	34.62	30.51
Bra018223.1-P	Field mustard	nucleus	36.54	30.16
Bra002533.1-P	Field mustard	nucleus	34.13	29.96
Bra012482.1-P	Field mustard	nucleus	40.87	29.93
Bra004041.1-P	Field mustard	nucleus	40.38	29.79
Bra001202.1-P	Field mustard	nucleus	43.27	29.61
Bra033948.1-P	Field mustard	nucleus	40.38	29.47
Bra006694.1-P	Field mustard	nucleus	34.13	29.34
Bra024760.1-P	Field mustard	nucleus	37.02	28.95
Bra029582.1-P	Field mustard	nucleus	44.71	28.88
Bra004297.1-P	Field mustard	nucleus	39.42	28.87
Bra025410.1-P	Field mustard	nucleus	37.02	28.73
Bra020624.1-P	Field mustard	nucleus	43.75	28.62
EES01143	Sorghum	nucleus	39.9	28.33
Bra010022.1-P	Field mustard	nucleus	43.75	28.17
Bra010021.1-P	Field mustard	nucleus	43.75	28.17
Bra020744.1-P	Field mustard	nucleus	34.62	28.02
Bra040274.1-P	Field mustard	nucleus	42.79	27.81
Bra015029.1-P	Field mustard	nucleus	35.58	27.31
Bra028550.1-P	Field mustard	nucleus	31.25	27.08
Bra001941.1-P	Field mustard	nucleus	35.58	27.01
Bra028369.1-P	Field mustard	nucleus	35.1	26.64
Bra036202.1-P	Field mustard	nucleus	34.13	26.59
Bra006977.1-P	Field mustard	nucleus	31.25	26.53
GSMUA_Achr9P07000_001	Banana	nucleus	42.79	7.08

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra001005	EnsemblPlants:Bra001005.1	EnsemblPlants:Bra001005.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4C9X6
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF688	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00025407EB	:	:	:

Description

AT3G01530 (E=6e-087) AtMYB57 | AtMYB57 (myb domain protein 57); DNA binding / transcription factor

Coordinates

chrA03:+:14345018..14345921

Molecular Weight (calculated)

23941.5 Da

IEP (calculated)

10.107

GRAVY (calculated)

-0.841

Length

208 amino acids

Sequence
(BLAST)

001: MKKTGRSGKE RITSQKEEEG TVRKGPWTME EDLILFNYIL NHGEGLWNSV AKASGLKRTG KSCRLRWLNY LRPDVRRGNI TAEEQLLIIQ LQAKLGNKWS
101: KIAKHLPGRT DNEIKNFWRT KIQRHMKLSS SKTMNSRHCL GSSQSSVMTT TDQGSSSKAS HMAESLKSTE TMTTSYNVME QCNDSYWSVE DLWPVQLFND
201: DHHQHQLL

Best Arabidopsis Sequence Match ( AT3G01530.1 )
(BLAST)

001: METTMKKKGR VKATITSQKE EEGTVRKGPW TMEEDFILFN YILNHGEGLW NSVAKASGLK RTGKSCRLRW LNYLRPDVRR GNITEEEQLL IIQLHAKLGN
101: RWSKIAKHLP GRTDNEIKNF WRTKIQRHMK VSSENMMNHQ HHCSGNSQSS GMTTQGSSGK AIDTAESFSQ AKTTTFNVVE QQSNENYWNV EDLWPVHLLN
201: GDHHVI

Arabidopsis Description

MYB57Transcription factor MYB57 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSA1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.