Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G415000.1 | Wheat | nucleus | 93.65 | 77.63 |
| TraesCS1A01G406600.1 | Wheat | mitochondrion | 93.12 | 70.68 |
| KRG94092 | Soybean | nucleus | 32.28 | 68.54 |
| Solyc02g086690.2.1 | Tomato | nucleus | 31.75 | 63.83 |
| HORVU1Hr1G089770.2 | Barley | nucleus | 87.83 | 56.66 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 41.8 | 40.31 |
| Solyc02g067760.2.1 | Tomato | nucleus | 39.15 | 37.95 |
| VIT_14s0066g01090.t01 | Wine grape | nucleus | 37.04 | 37.04 |
| KRH07188 | Soybean | nucleus | 39.15 | 35.58 |
| KRH56587 | Soybean | nucleus | 38.62 | 35.44 |
| KRG94086 | Soybean | nucleus | 38.62 | 35.44 |
| KRG93265 | Soybean | nucleus | 37.57 | 34.63 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 34.92 | 33.85 |
| PGSC0003DMT400001278 | Potato | nucleus | 37.04 | 33.82 |
| CDY37512 | Canola | nucleus | 35.45 | 33.33 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 37.04 | 32.86 |
| CDY49063 | Canola | nucleus | 35.98 | 32.85 |
| AT3G01530.1 | Thale cress | nucleus | 35.45 | 32.52 |
| CDX91944 | Canola | nucleus | 35.45 | 32.37 |
| Bra001005.1-P | Field mustard | nucleus | 35.45 | 32.21 |
| CDX74303 | Canola | nucleus | 35.45 | 32.21 |
| Bra039108.1-P | Field mustard | nucleus | 34.92 | 32.2 |
| Bra039067.1-P | Field mustard | nucleus | 39.15 | 31.9 |
| CDY20036 | Canola | nucleus | 39.15 | 31.9 |
| AT3G27810.1 | Thale cress | nucleus | 38.1 | 31.86 |
| Bra025300.1-P | Field mustard | nucleus | 38.62 | 31.47 |
| CDX86471 | Canola | nucleus | 38.62 | 31.47 |
| CDY44433 | Canola | nucleus | 38.62 | 31.47 |
| AT5G40350.1 | Thale cress | nucleus | 35.45 | 31.31 |
| CDY00146 | Canola | nucleus | 24.87 | 28.31 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 35.45 | 24.1 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 37.57 | 22.33 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 38.1 | 22.09 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 35.45 | 21.82 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 25.93 | 20.68 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 25.93 | 20.59 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 35.45 | 20.18 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 27.51 | 20.16 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 28.04 | 20.08 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 24.87 | 19.11 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 26.98 | 19.03 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 27.51 | 18.98 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 32.28 | 17.38 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 47.09 | 7.08 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF531 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS1B01G436800 | EnsemblPlants:TraesCS1B01G436800.1 |
| TIGR:cd00167 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:659779593..659780664
Molecular Weight (calculated)
19513.7 Da
IEP (calculated)
4.501
GRAVY (calculated)
-0.225
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MQCAAGGGGG GEPAVRKGPW TMEEDLVLAD YVAANGEGAW NSLARAAGLN RTGKSCRLRW LNYLRPDVRR GNITPEEHLL IVELQASDSA GCQLLSSAAV
101: TESQSSSSNS VGRPGAMPHY DVVAAATQPG GWGDHQLGYA VQGGGGAACA GGMDGGVPPE FLQAAAVAGD NFWGLEEFWP TVPSLHGDY
101: TESQSSSSNS VGRPGAMPHY DVVAAATQPG GWGDHQLGYA VQGGGGAACA GGMDGGVPPE FLQAAAVAGD NFWGLEEFWP TVPSLHGDY
001: MEKRGGGSSG GSGSSAEAEV RKGPWTMEED LILINYIANH GDGVWNSLAK SAGLKRTGKS CRLRWLNYLR PDVRRGNITP EEQLIIMELH AKWGNRWSKI
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
101: AKHLPGRTDN EIKNFWRTRI QKYIKQSDVT TTSSVGSHHS SEINDQAAST SSHNVFCTQD QAMETYSPTP TSYQHTNMEF NYGNYSAAAV TATVDYPVPM
201: TVDDQTGENY WGMDDIWSSM HLLNGN
Arabidopsis Description
MYB21Transcription factor MYB21 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK95]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.