Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G076200.1 | Wheat | nucleus | 97.55 | 98.15 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 96.32 | 97.21 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 93.56 | 93.85 |
| CDX85422 | Canola | nucleus | 36.2 | 64.48 |
| CDX86220 | Canola | nucleus | 36.2 | 61.14 |
| PGSC0003DMT400011745 | Potato | nucleus | 37.12 | 51.71 |
| PGSC0003DMT400011750 | Potato | nucleus | 35.58 | 50.43 |
| Solyc12g099130.1.1 | Tomato | nucleus | 35.58 | 49.36 |
| Solyc12g099120.1.1 | Tomato | nucleus | 37.12 | 48.99 |
| AT1G48000.1 | Thale cress | nucleus | 35.89 | 48.15 |
| Solyc01g057910.2.1 | Tomato | nucleus | 41.41 | 47.04 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 43.87 | 46.73 |
| PGSC0003DMT400022600 | Potato | nucleus | 41.72 | 45.79 |
| Bra001202.1-P | Field mustard | nucleus | 41.1 | 44.08 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 42.02 | 43.08 |
| PGSC0003DMT400011748 | Potato | nucleus | 38.96 | 43.05 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 40.49 | 43.0 |
| Solyc12g099140.1.1 | Tomato | nucleus | 39.26 | 42.67 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 36.2 | 42.45 |
| CDY24688 | Canola | nucleus | 41.41 | 42.32 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 27.61 | 42.25 |
| CDY05270 | Canola | nucleus | 41.41 | 41.93 |
| Bra029582.1-P | Field mustard | nucleus | 41.41 | 41.93 |
| CDX99864 | Canola | nucleus | 41.1 | 41.88 |
| Bra040274.1-P | Field mustard | nucleus | 41.1 | 41.88 |
| CDY34949 | Canola | nucleus | 41.1 | 41.88 |
| KRH02414 | Soybean | nucleus | 41.1 | 41.61 |
| CDY33891 | Canola | nucleus | 40.49 | 41.51 |
| CDY05611 | Canola | nucleus | 40.49 | 41.51 |
| Bra020624.1-P | Field mustard | nucleus | 40.49 | 41.51 |
| KRH50671 | Soybean | nucleus | 41.1 | 41.23 |
| AT3G06490.1 | Thale cress | nucleus | 40.8 | 41.18 |
| AT5G49620.2 | Thale cress | nucleus | 40.49 | 41.12 |
| Solyc05g053330.2.1 | Tomato | nucleus | 39.88 | 40.88 |
| Bra010022.1-P | Field mustard | nucleus | 39.88 | 40.25 |
| Bra010021.1-P | Field mustard | nucleus | 39.88 | 40.25 |
| PGSC0003DMT400069841 | Potato | nucleus | 38.96 | 39.2 |
| KRH36928 | Soybean | nucleus | 39.88 | 38.24 |
| KRG97314 | Soybean | nucleus | 39.88 | 38.12 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 22.09 | 38.1 |
| GSMUA_Achr11P... | Banana | nucleus | 38.96 | 36.92 |
| CDY70282 | Canola | nucleus | 32.21 | 35.71 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 35.58 | 34.94 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 24.54 | 33.76 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 24.85 | 32.93 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 35.28 | 32.76 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 25.77 | 32.56 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 23.31 | 31.93 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 26.07 | 31.02 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 24.85 | 30.68 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 24.85 | 30.22 |
| CDX74100 | Canola | nucleus | 30.98 | 29.97 |
| CDY58600 | Canola | nucleus | 21.47 | 21.67 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G094500.1 | EnsemblPlantsGene:TraesCS1B01G094500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF921 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:96488255..96489494
Molecular Weight (calculated)
35890.1 Da
IEP (calculated)
6.347
GRAVY (calculated)
-0.457
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDKEYYKA CMGMEALPMS PAGFSAVTTE VTMAVATASE DEGDLKRGPW TAEEDMLLVD YISKHGEGRW NSLARCAGLR RTGKSCRLRW LNYLRPDVRR
101: GNITPEEQLL ILDLHSRWGN RWSKIAQRLP GRTDNEVKNY WRTRVQKHAK QLHCDVNSDR FRDVVRQVWM PRLLERIQAE SSSAAAAAAA GVGVPALTRA
201: MSSPAGASQY HYHCVDHASS GEPSRKVAVT MSPDTSSTLR SSLSPAETSH GAHFPAWGAA TATANVDGSM MQCAGREGGA IGGDQYVIHG DSLSGSWSEL
301: LAATDIPDFE FGNFDDNLWS LEDIYC
101: GNITPEEQLL ILDLHSRWGN RWSKIAQRLP GRTDNEVKNY WRTRVQKHAK QLHCDVNSDR FRDVVRQVWM PRLLERIQAE SSSAAAAAAA GVGVPALTRA
201: MSSPAGASQY HYHCVDHASS GEPSRKVAVT MSPDTSSTLR SSLSPAETSH GAHFPAWGAA TATANVDGSM MQCAGREGGA IGGDQYVIHG DSLSGSWSEL
301: LAATDIPDFE FGNFDDNLWS LEDIYC
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.