Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020624.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY05611 | Canola | nucleus | 98.74 | 98.74 |
| CDX85422 | Canola | nucleus | 51.57 | 89.62 |
| CDX86220 | Canola | nucleus | 50.94 | 83.94 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 31.13 | 77.34 |
| AT5G49620.2 | Thale cress | nucleus | 72.33 | 71.65 |
| CDX86221 | Canola | nucleus | 15.72 | 71.43 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 39.94 | 69.78 |
| CDY24688 | Canola | nucleus | 69.18 | 68.97 |
| CDY05270 | Canola | nucleus | 68.24 | 67.39 |
| CDX99864 | Canola | nucleus | 67.3 | 66.88 |
| CDY34949 | Canola | nucleus | 67.3 | 66.88 |
| PGSC0003DMT400011745 | Potato | nucleus | 48.11 | 65.38 |
| PGSC0003DMT400011750 | Potato | nucleus | 46.86 | 64.78 |
| Solyc12g099130.1.1 | Tomato | nucleus | 46.54 | 62.98 |
| CDY70282 | Canola | nucleus | 58.18 | 62.93 |
| Solyc12g099120.1.1 | Tomato | nucleus | 48.74 | 62.75 |
| PGSC0003DMT400022600 | Potato | nucleus | 54.72 | 58.59 |
| Solyc01g057910.2.1 | Tomato | nucleus | 52.83 | 58.54 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 31.76 | 57.71 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 54.09 | 56.21 |
| CDY58599 | Canola | nucleus | 18.24 | 54.72 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 43.71 | 54.3 |
| GSMUA_Achr11P... | Banana | nucleus | 44.34 | 53.82 |
| GSMUA_Achr11P... | Banana | nucleus | 44.03 | 53.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.34 | 52.81 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 42.77 | 52.31 |
| CDX74100 | Canola | nucleus | 55.35 | 52.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.91 | 51.96 |
| KRH50671 | Soybean | nucleus | 52.83 | 51.69 |
| PGSC0003DMT400011748 | Potato | nucleus | 47.8 | 51.53 |
| Solyc12g099140.1.1 | Tomato | nucleus | 48.43 | 51.33 |
| CDX95420 | Canola | nucleus | 37.42 | 51.29 |
| KRH02414 | Soybean | nucleus | 51.89 | 51.24 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 43.08 | 50.74 |
| Solyc05g053330.2.1 | Tomato | nucleus | 49.37 | 49.37 |
| KRG97314 | Soybean | nucleus | 52.83 | 49.27 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 41.51 | 49.07 |
| KRH36928 | Soybean | nucleus | 52.2 | 48.82 |
| PGSC0003DMT400069841 | Potato | nucleus | 48.74 | 47.84 |
| CDY37512 | Canola | nucleus | 30.19 | 47.76 |
| CDY27504 | Canola | nucleus | 40.25 | 47.06 |
| CDY49063 | Canola | nucleus | 30.5 | 46.86 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 42.45 | 46.71 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 42.77 | 46.42 |
| TraesCSU01G069000.1 | Wheat | nucleus | 42.14 | 46.21 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 42.45 | 46.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.62 | 45.82 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 45.91 | 45.77 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 45.91 | 45.77 |
| CDX91944 | Canola | nucleus | 29.56 | 45.41 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 45.28 | 45.28 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 41.51 | 45.05 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 39.31 | 44.96 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 39.31 | 44.96 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 38.99 | 44.6 |
| CDY00146 | Canola | nucleus | 23.27 | 44.58 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 39.31 | 44.33 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 42.77 | 44.3 |
| CDX80085 | Canola | nucleus | 27.67 | 44.22 |
| CDX74303 | Canola | nucleus | 28.62 | 43.75 |
| CDY20036 | Canola | nucleus | 31.45 | 43.1 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 36.79 | 43.01 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 41.51 | 42.86 |
| CDY44433 | Canola | nucleus | 31.13 | 42.67 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 37.11 | 42.45 |
| Zm00001d028930_P001 | Maize | nucleus | 44.65 | 42.26 |
| CDX86471 | Canola | nucleus | 30.82 | 42.24 |
| KXG39500 | Sorghum | nucleus | 44.34 | 41.96 |
| EES00624 | Sorghum | nucleus | 39.94 | 41.5 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 41.82 | 41.05 |
| KXG36991 | Sorghum | nucleus | 44.03 | 40.94 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 41.51 | 40.87 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 41.51 | 40.62 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 41.51 | 40.49 |
| GSMUA_Achr11P... | Banana | nucleus | 43.71 | 40.41 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 41.82 | 40.18 |
| Zm00001d007191_P001 | Maize | nucleus | 43.71 | 40.06 |
| Zm00001d040594_P001 | Maize | nucleus | 38.05 | 39.93 |
| Zm00001d047579_P001 | Maize | nucleus | 43.4 | 39.54 |
| CDX96033 | Canola | nucleus | 34.91 | 39.08 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 45.28 | 39.02 |
| CDY69488 | Canola | nucleus | 33.96 | 38.99 |
| CDY69953 | Canola | nucleus | 34.28 | 38.65 |
| CDY42115 | Canola | nucleus | 33.65 | 38.63 |
| CDY01906 | Canola | nucleus | 34.59 | 38.6 |
| Zm00001d009066_P001 | Maize | nucleus | 38.36 | 38.36 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 34.59 | 38.33 |
| CDY12705 | Canola | nucleus | 33.65 | 37.54 |
| CDX84981 | Canola | nucleus | 33.96 | 37.5 |
| CDY03859 | Canola | nucleus | 33.65 | 37.28 |
| CDY54094 | Canola | nucleus | 33.33 | 37.19 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 38.05 | 37.12 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 37.74 | 36.59 |
| EES17207 | Sorghum | nucleus | 38.68 | 36.5 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 38.05 | 36.45 |
| Zm00001d030644_P001 | Maize | nucleus | 39.94 | 36.18 |
| EES10257 | Sorghum | nucleus | 40.88 | 35.62 |
| Zm00001d010933_P001 | Maize | nucleus | 40.88 | 35.42 |
| Zm00001d048647_P001 | Maize | nucleus | 38.99 | 35.23 |
| Zm00001d024726_P001 | Maize | nucleus | 38.36 | 34.37 |
| CDX77436 | Canola | nucleus | 27.67 | 33.85 |
| CDY61190 | Canola | nucleus | 27.67 | 33.72 |
| Os05t0132700-01 | Rice | nucleus | 22.64 | 33.49 |
| CDY70097 | Canola | nucleus | 24.84 | 33.47 |
| CDX71075 | Canola | nucleus | 25.16 | 33.2 |
| CDX94829 | Canola | nucleus | 28.3 | 32.97 |
| CDX80230 | Canola | nucleus | 24.53 | 32.91 |
| CDY49581 | Canola | nucleus | 24.53 | 32.91 |
| CDX93006 | Canola | nucleus | 28.3 | 32.85 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 37.11 | 32.51 |
| CDY64694 | Canola | nucleus | 27.99 | 32.48 |
| CDY49231 | Canola | nucleus | 27.04 | 32.09 |
| Zm00001d024725_P001 | Maize | nucleus | 40.88 | 32.02 |
| CDX88722 | Canola | nucleus | 24.21 | 31.82 |
| KXG21220 | Sorghum | nucleus | 40.57 | 31.77 |
| CDY45895 | Canola | nucleus | 24.84 | 30.74 |
| CDX73572 | Canola | nucleus | 23.58 | 30.61 |
| CDX78153 | Canola | nucleus | 23.58 | 30.61 |
| CDX86354 | Canola | nucleus | 25.47 | 30.22 |
| CDX67561 | Canola | nucleus | 22.64 | 30.0 |
| CDY13311 | Canola | nucleus | 22.64 | 29.51 |
| CDX85285 | Canola | nucleus | 24.84 | 29.26 |
| CDY00083 | Canola | nucleus | 24.84 | 29.26 |
| CDY19978 | Canola | nucleus | 24.53 | 29.21 |
| CDX86040 | Canola | nucleus | 24.53 | 28.06 |
| CDX86041 | Canola | nucleus | 24.53 | 28.06 |
| CDX99125 | Canola | nucleus | 24.53 | 28.06 |
| KXG21221 | Sorghum | nucleus | 39.62 | 26.42 |
| CDY35782 | Canola | nucleus | 15.41 | 23.9 |
| CDY58600 | Canola | nucleus | 20.75 | 20.43 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078H7Q1 | UniProt:A0A078H7Q1 | EnsemblPlants:CDY33891 | ProteinID:CDY33891 |
| ProteinID:CDY33891.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00055393001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002546704 | SEG:seg |
Description
BnaA02g30960DBnaA02g30960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7Q1]
Coordinates
chrLK032324:+:49699..51650
Molecular Weight (calculated)
36695.7 Da
IEP (calculated)
5.215
GRAVY (calculated)
-0.794
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDKRSLMMN KNIGDFENNV DEEMDLRRGP WTVEEDFKLI NYISTHGEGR WNSLSRCAGL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHSRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA SASTSTGSAT TSSCVTTPSD QFLMTSYDAG LNNNNNTNMD
201: HLNFMSNPNG YVTQETSSVS VSPTSGLTEY HIGSEVEKVE NNQDQSLVGP QIMSPPQNYL DVNGGLLSED LTQSYHNWFE NDNGMISPYS DSFWNIGSDE
301: DFWLLLQQQQ QLVNNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLRCDVNSQ QFKDTMRYLW MPRLVERIQA SASTSTGSAT TSSCVTTPSD QFLMTSYDAG LNNNNNTNMD
201: HLNFMSNPNG YVTQETSSVS VSPTSGLTEY HIGSEVEKVE NNQDQSLVGP QIMSPPQNYL DVNGGLLSED LTQSYHNWFE NDNGMISPYS DSFWNIGSDE
301: DFWLLLQQQQ QLVNNGSF
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.