Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028930_P001 | Maize | nucleus | 85.71 | 85.71 |
| Zm00001d047579_P001 | Maize | nucleus | 88.69 | 85.39 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 75.0 | 79.0 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 74.4 | 78.62 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 74.4 | 78.37 |
| Os03t0315400-01 | Rice | nucleus | 73.21 | 74.77 |
| CDX85422 | Canola | nucleus | 38.69 | 71.04 |
| CDX86220 | Canola | nucleus | 38.69 | 67.36 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 72.92 | 66.4 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 44.64 | 55.56 |
| PGSC0003DMT400011745 | Potato | nucleus | 37.2 | 53.42 |
| Solyc12g099130.1.1 | Tomato | nucleus | 37.2 | 53.19 |
| AT1G48000.1 | Thale cress | nucleus | 38.1 | 52.67 |
| PGSC0003DMT400011750 | Potato | nucleus | 36.01 | 52.61 |
| Solyc12g099120.1.1 | Tomato | nucleus | 37.8 | 51.42 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 46.43 | 50.98 |
| Solyc01g057910.2.1 | Tomato | nucleus | 42.56 | 49.83 |
| PGSC0003DMT400022600 | Potato | nucleus | 43.45 | 49.16 |
| Bra001202.1-P | Field mustard | nucleus | 43.15 | 47.7 |
| Solyc05g053330.2.1 | Tomato | nucleus | 43.75 | 46.23 |
| KRH02414 | Soybean | nucleus | 44.05 | 45.96 |
| KRH50671 | Soybean | nucleus | 44.35 | 45.85 |
| PGSC0003DMT400011748 | Potato | nucleus | 39.88 | 45.42 |
| PGSC0003DMT400069841 | Potato | nucleus | 43.75 | 45.37 |
| KRH36928 | Soybean | nucleus | 44.94 | 44.41 |
| Bra020624.1-P | Field mustard | nucleus | 41.96 | 44.34 |
| CDY33891 | Canola | nucleus | 41.96 | 44.34 |
| CDY05611 | Canola | nucleus | 41.96 | 44.34 |
| Solyc12g099140.1.1 | Tomato | nucleus | 39.58 | 44.33 |
| CDY24688 | Canola | nucleus | 41.96 | 44.2 |
| CDY05270 | Canola | nucleus | 42.26 | 44.1 |
| CDY34949 | Canola | nucleus | 41.96 | 44.06 |
| CDX99864 | Canola | nucleus | 41.96 | 44.06 |
| Bra040274.1-P | Field mustard | nucleus | 41.96 | 44.06 |
| KRG97314 | Soybean | nucleus | 44.64 | 43.99 |
| Bra029582.1-P | Field mustard | nucleus | 41.96 | 43.79 |
| AT3G06490.1 | Thale cress | nucleus | 41.96 | 43.65 |
| Bra010021.1-P | Field mustard | nucleus | 41.67 | 43.34 |
| Bra010022.1-P | Field mustard | nucleus | 41.67 | 43.34 |
| AT5G49620.2 | Thale cress | nucleus | 41.37 | 43.3 |
| KXG36991 | Sorghum | nucleus | 44.05 | 43.27 |
| EES00624 | Sorghum | nucleus | 39.29 | 43.14 |
| CDY70282 | Canola | nucleus | 35.12 | 40.14 |
| EES10257 | Sorghum | nucleus | 41.96 | 38.63 |
| EES17207 | Sorghum | nucleus | 38.1 | 37.98 |
| KXG21220 | Sorghum | nucleus | 43.45 | 35.96 |
| KXG29192 | Sorghum | nucleus | 23.81 | 35.09 |
| KXG23736 | Sorghum | nucleus | 24.7 | 34.58 |
| CDX74100 | Canola | nucleus | 33.63 | 33.53 |
| EES01143 | Sorghum | nucleus | 29.17 | 33.45 |
| EES00381 | Sorghum | nucleus | 38.39 | 33.16 |
| EES07157 | Sorghum | nucleus | 27.68 | 32.29 |
| EER92876 | Sorghum | nucleus | 23.51 | 31.23 |
| KXG26684 | Sorghum | nucleus | 26.19 | 31.21 |
| KXG29190 | Sorghum | nucleus | 19.35 | 30.66 |
| KXG21221 | Sorghum | nucleus | 42.56 | 29.98 |
| OQU77249 | Sorghum | nucleus | 25.0 | 27.27 |
| EES17592 | Sorghum | nucleus | 24.7 | 24.85 |
| CDY58600 | Canola | nucleus | 21.43 | 22.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1B6QNJ9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0045893 | GO:GO:1901002 | GO:GO:1902584 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EnsemblPlants:KXG39500 | ProteinID:KXG39500 | ProteinID:KXG39500.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF743 | InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3001G391500 | SUPFAM:SSF46689 |
| UniParc:UPI00081ADF8F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:67801819..67803600
Molecular Weight (calculated)
36773.7 Da
IEP (calculated)
4.694
GRAVY (calculated)
-0.507
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMAHERDAS SEEEVMAGEL RRGPWTVEED LLLVNYVAAH GEGRWNSLAR SAGLKRTGKS CRLRWLNYLR PDLRRGNITP QEQLLILELH SRWGNRWSKI
101: AQHLPGRTDN EIKNYWRTRV QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAAAANAS AGGAPPQPGA AADTPLSSSW QQGGADDGLY ASPEELPTDA
201: CSWPPADCYY PAAVGDGDHH QLLMMNNPAV GPELSSTTAG SSSPSSDSGA GAQPCWLVAP VGGAEWFTTA CDASSAVLAG QQQQQQQSSC LLGETTTWAS
301: SELPELGVAD FEIGSFDVES IWSMDDNLWF TQAQGV
101: AQHLPGRTDN EIKNYWRTRV QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAAAANAS AGGAPPQPGA AADTPLSSSW QQGGADDGLY ASPEELPTDA
201: CSWPPADCYY PAAVGDGDHH QLLMMNNPAV GPELSSTTAG SSSPSSDSGA GAQPCWLVAP VGGAEWFTTA CDASSAVLAG QQQQQQQSSC LLGETTTWAS
301: SELPELGVAD FEIGSFDVES IWSMDDNLWF TQAQGV
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.