CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21220	Sorghum	nucleus	57.44	67.49
CDX85422	Canola	nucleus	25.79	67.21
CDX86220	Canola	nucleus	25.79	63.73
Zm00001d024725_P001	Maize	nucleus	54.09	63.55
PGSC0003DMT400011745	Potato	nucleus	24.53	50.0
PGSC0003DMT400011750	Potato	nucleus	23.69	49.13
Solyc12g099130.1.1	Tomato	nucleus	24.11	48.94
Solyc12g099120.1.1	Tomato	nucleus	25.16	48.58
AT1G48000.1	Thale cress	nucleus	24.11	47.33
Solyc01g057910.2.1	Tomato	nucleus	27.25	45.3
VIT_05s0077g00500.t01	Wine grape	nucleus	28.93	45.1
PGSC0003DMT400022600	Potato	nucleus	27.25	43.77
PGSC0003DMT400011748	Potato	nucleus	26.83	43.39
KXG39500	Sorghum	nucleus	29.98	42.56
Solyc05g053330.2.1	Tomato	nucleus	28.3	42.45
EES00624	Sorghum	nucleus	26.83	41.83
KRH02414	Soybean	nucleus	28.09	41.61
KRH50671	Soybean	nucleus	28.3	41.54
Solyc12g099140.1.1	Tomato	nucleus	25.79	41.0
KRH36928	Soybean	nucleus	29.14	40.88
KRG97314	Soybean	nucleus	29.14	40.76
Bra001202.1-P	Field mustard	nucleus	25.58	40.13
CDY33891	Canola	nucleus	26.42	39.62
CDY05611	Canola	nucleus	26.42	39.62
Bra020624.1-P	Field mustard	nucleus	26.42	39.62
PGSC0003DMT400069841	Potato	nucleus	26.83	39.51
Bra010022.1-P	Field mustard	nucleus	26.62	39.32
Bra010021.1-P	Field mustard	nucleus	26.62	39.32
KXG36991	Sorghum	nucleus	27.67	38.6
CDY24688	Canola	nucleus	25.79	38.56
AT5G49620.2	Thale cress	nucleus	25.79	38.32
EES17207	Sorghum	nucleus	27.04	38.28
Bra029582.1-P	Field mustard	nucleus	25.79	38.2
Bra040274.1-P	Field mustard	nucleus	25.58	38.12
CDX99864	Canola	nucleus	25.58	38.12
CDY34949	Canola	nucleus	25.58	38.12
CDY05270	Canola	nucleus	25.58	37.89
AT3G06490.1	Thale cress	nucleus	25.58	37.77
EES10257	Sorghum	nucleus	28.72	37.53
CDY70282	Canola	nucleus	20.55	33.33
EER92876	Sorghum	nucleus	17.19	32.41
EES00381	Sorghum	nucleus	26.21	32.13
KXG23736	Sorghum	nucleus	15.93	31.67
EES01143	Sorghum	nucleus	19.29	31.4
KXG29190	Sorghum	nucleus	13.63	30.66
EES07157	Sorghum	nucleus	18.45	30.56
KXG29192	Sorghum	nucleus	14.26	29.82
KXG26684	Sorghum	nucleus	17.19	29.08
OQU77249	Sorghum	nucleus	17.82	27.6
CDX74100	Canola	nucleus	19.5	27.6
EES17592	Sorghum	nucleus	18.66	26.65
CDY58600	Canola	nucleus	14.68	21.67

Protein Annotations

EnsemblPlants:KXG21221	EnsemblPlantsGene:SORBI_3009G032000	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF921	PFAM:PF00249	PFscan:PS51294	ProteinID:KXG21221	ProteinID:KXG21221.1	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00081AC4E3	UniProt:A0A1B6P6K7	MapMan:15.5.2.1	:

Description

hypothetical protein

Coordinates

chr9:-:2870679..2872596

Molecular Weight (calculated)

51972.8 Da

IEP (calculated)

7.753

GRAVY (calculated)

-0.414

Length

477 amino acids

Sequence
(BLAST)

001: MDTGARRRRR RRRQRSELAT CFISLLRSNC LVRRVGDTRT RTRAHSDPSI VVLTSSSAGS SSYINPSSSS RSPTIPSLSV CVDPPPQLPL HHRPPSFSSS
101: STIYYLKKLA RAHTPQLIEL THHHHLIRDS DPPLASMDDM DMAMAMVSFD DLDQVLAMSP SSSATSSAPV AAAQPAAAGS SSDDEAAAIC ADLRRGPWTA
201: DEDILLVNYI AVHGEGRWNS LARSAGLKRT GKSCRLRWLN YLRPDVRRGN ITAEEQLLIL DLHSRWGNRW SKIAQHLPGR TDNEIKNYWR TRVQKHARHL
301: RCDVNSASFR HVVRHVWMPR LRERVQAAAG RDAGEGCGGG VQSPAAAPLV PVVVEAPAAT TTASAPSACY DYYDASSALR RPSSSTLTAD DTSHDYAGVY
401: AYTSAAAATP TNDNQGCRQM TTDDDVFAGT ALSELLATSG RDDDSSSASM IGLPEFGFGD LEDGLWSLDD LCLQQLC

Best Arabidopsis Sequence Match ( AT3G06490.1 )
(BLAST)

001: MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF

Arabidopsis Description

MYB108Transcription factor MYB108 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.