Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01370_001 | Banana | nucleus | 27.51 | 86.29 |
| Zm00001d008528_P001 | Maize | nucleus | 72.49 | 77.9 |
| GSMUA_Achr10P... | Banana | nucleus | 32.13 | 71.43 |
| Zm00001d040019_P001 | Maize | nucleus | 65.55 | 70.44 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 34.45 | 68.72 |
| CDY58599 | Canola | nucleus | 18.25 | 66.98 |
| Os01t0128000-01 | Rice | nucleus | 59.64 | 66.29 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 54.76 | 61.92 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 55.01 | 61.85 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 55.53 | 61.54 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 55.53 | 61.54 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 38.3 | 59.84 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 41.13 | 54.79 |
| GSMUA_Achr11P... | Banana | nucleus | 43.44 | 53.65 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 41.9 | 52.92 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 39.33 | 50.49 |
| PGSC0003DMT400037716 | Potato | nucleus | 33.16 | 47.25 |
| Solyc05g009230.1.1 | Tomato | nucleus | 32.9 | 46.72 |
| AT1G68320.1 | Thale cress | nucleus | 32.65 | 44.41 |
| CDY69488 | Canola | nucleus | 31.62 | 44.4 |
| CDX96033 | Canola | nucleus | 32.39 | 44.37 |
| Bra004297.1-P | Field mustard | nucleus | 32.39 | 44.37 |
| PGSC0003DMT400014383 | Potato | nucleus | 31.62 | 44.24 |
| CDY01906 | Canola | nucleus | 32.39 | 44.21 |
| Solyc03g119370.1.1 | Tomato | nucleus | 31.62 | 43.93 |
| CDY69953 | Canola | nucleus | 31.62 | 43.62 |
| Bra004041.1-P | Field mustard | nucleus | 31.36 | 43.26 |
| CDY12705 | Canola | nucleus | 31.62 | 43.16 |
| Bra033948.1-P | Field mustard | nucleus | 31.62 | 43.16 |
| CDY54094 | Canola | nucleus | 31.36 | 42.81 |
| Bra012482.1-P | Field mustard | nucleus | 31.11 | 42.61 |
| KRH41648 | Soybean | nucleus | 33.68 | 41.99 |
| KRH60346 | Soybean | nucleus | 34.19 | 41.96 |
| CDY03859 | Canola | nucleus | 30.85 | 41.81 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 35.22 | 41.77 |
| CDY42115 | Canola | nucleus | 29.56 | 41.52 |
| CDX84981 | Canola | nucleus | 30.59 | 41.32 |
| Bra024760.1-P | Field mustard | nucleus | 27.25 | 39.85 |
| KRH48497 | Soybean | nucleus | 30.85 | 38.59 |
| KXG39500 | Sorghum | nucleus | 33.16 | 38.39 |
| KRH39173 | Soybean | nucleus | 30.59 | 38.39 |
| KXG36991 | Sorghum | nucleus | 33.16 | 37.72 |
| EES00624 | Sorghum | nucleus | 29.05 | 36.93 |
| AT1G25340.3 | Thale cress | nucleus | 28.79 | 36.36 |
| EES10257 | Sorghum | nucleus | 33.16 | 35.34 |
| EES17207 | Sorghum | nucleus | 30.33 | 35.01 |
| KXG29192 | Sorghum | nucleus | 19.28 | 32.89 |
| EER92876 | Sorghum | nucleus | 21.34 | 32.81 |
| KXG23736 | Sorghum | nucleus | 20.05 | 32.5 |
| KXG21220 | Sorghum | nucleus | 32.65 | 31.28 |
| KXG29190 | Sorghum | nucleus | 16.71 | 30.66 |
| EES07157 | Sorghum | nucleus | 21.59 | 29.17 |
| KXG26684 | Sorghum | nucleus | 21.08 | 29.08 |
| EES01143 | Sorghum | nucleus | 21.08 | 27.99 |
| OQU77249 | Sorghum | nucleus | 21.59 | 27.27 |
| KXG21221 | Sorghum | nucleus | 32.13 | 26.21 |
| EES17592 | Sorghum | nucleus | 21.59 | 25.15 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8073365 | UniProt:C5XQX0 | EnsemblPlants:EES00381 | ProteinID:EES00381 |
| ProteinID:EES00381.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 |
| EnsemblPlantsGene:SORBI_3003G087600 | SUPFAM:SSF46689 | UniParc:UPI0001A84804 | RefSeq:XP_002455261.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:7603608..7605411
Molecular Weight (calculated)
42245.3 Da
IEP (calculated)
6.297
GRAVY (calculated)
-0.528
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQRKGASMA AAVTSSKHHE DQEMMMELRR GPWTLEEDNL LMNYIACHGE GRWNLLARCS GLKRTGKSCR LRWLNYLKPD IKRGNLTPEE QLLILELHSK
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLRVDAN SAVFRDAVRC YWMPRLLEKM AATSTAHDLH GELLPPAPPL HPSHVVAGMA SSSSPIHGSH
201: DHEQDPTSNA PAGSGYYHQR YPVDPSPSTS TTSGSTSAAA LPPVPCFSEL SWVDQYGYGP YSYTTDLDGA AGVSSFDDDS AALESLGLDG LDLGPAEADS
301: DVLYSDTTLL DYLNSTCAGG GTMMTMMGGG VGGGSVVHNS CGGAMGGCGD DVAEYGRPTS SSSWRTDELV FQASARKLGD HQHQWGGGI
101: WGNRWSRIAQ HLPGRTDNEI KNYWRTRVQK QARQLRVDAN SAVFRDAVRC YWMPRLLEKM AATSTAHDLH GELLPPAPPL HPSHVVAGMA SSSSPIHGSH
201: DHEQDPTSNA PAGSGYYHQR YPVDPSPSTS TTSGSTSAAA LPPVPCFSEL SWVDQYGYGP YSYTTDLDGA AGVSSFDDDS AALESLGLDG LDLGPAEADS
301: DVLYSDTTLL DYLNSTCAGG GTMMTMMGGG VGGGSVVHNS CGGAMGGCGD DVAEYGRPTS SSSWRTDELV FQASARKLGD HQHQWGGGI
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.