Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037716 | Potato | nucleus | 93.8 | 94.14 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 36.5 | 80.65 |
| Solyc02g086690.2.1 | Tomato | nucleus | 22.26 | 64.89 |
| GSMUA_Achr10P... | Banana | nucleus | 41.24 | 64.57 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 39.78 | 55.9 |
| Solyc02g067760.2.1 | Tomato | nucleus | 35.04 | 49.23 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 44.53 | 49.0 |
| Solyc09g008390.1.1 | Tomato | nucleus | 22.99 | 48.09 |
| Solyc03g119370.1.1 | Tomato | nucleus | 48.18 | 47.14 |
| Solyc12g099130.1.1 | Tomato | nucleus | 39.42 | 45.96 |
| Solyc12g099120.1.1 | Tomato | nucleus | 40.51 | 44.94 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 47.08 | 44.79 |
| KRG90844 | Soybean | nucleus | 49.63 | 44.3 |
| KRH35934 | Soybean | nucleus | 48.54 | 43.18 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 45.26 | 42.47 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 45.99 | 41.58 |
| Solyc11g073120.1.1 | Tomato | nucleus | 32.12 | 40.55 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 44.53 | 39.61 |
| Solyc01g057910.2.1 | Tomato | nucleus | 41.24 | 39.37 |
| GSMUA_Achr11P... | Banana | nucleus | 44.53 | 38.73 |
| Solyc05g053150.1.1 | Tomato | nucleus | 32.12 | 38.43 |
| Os01t0128000-01 | Rice | nucleus | 46.72 | 36.57 |
| Solyc05g053330.2.1 | Tomato | nucleus | 42.34 | 36.48 |
| Solyc10g083900.1.1 | Tomato | nucleus | 25.91 | 35.5 |
| Zm00001d008528_P001 | Maize | nucleus | 46.72 | 35.36 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 44.16 | 35.17 |
| Solyc12g099140.1.1 | Tomato | nucleus | 38.32 | 35.0 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 44.16 | 34.97 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 44.53 | 34.76 |
| Solyc06g005330.2.1 | Tomato | nucleus | 29.93 | 34.75 |
| Solyc09g090790.2.1 | Tomato | nucleus | 31.75 | 34.66 |
| Zm00001d040019_P001 | Maize | nucleus | 45.62 | 34.53 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 44.16 | 34.47 |
| EES00381 | Sorghum | nucleus | 46.72 | 32.9 |
| Solyc02g089190.1.1 | Tomato | nucleus | 28.47 | 32.64 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4BX97 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc05g009230.1 | EnsemblPlants:Solyc05g009230.1.1 | UniParc:UPI000276689B |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:3372023..3373258
Molecular Weight (calculated)
31993.6 Da
IEP (calculated)
7.048
GRAVY (calculated)
-0.886
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNNNNNILS NKDELFELRR GPWTLEEDNL LIHYISTHGE GRWNALAKCA GLKRTGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKIAQ
101: HLPGRTDNEI KNYWRTRVQK QARQLKVDSN SKKFVEAIKN LWVPRLLEKM EQCSSSSSIE KKLPNLPLIN NNQEPCTKHN KSHDIAANNN NTTWGSQESS
201: LDSMHVLNEN MNSTHQYDEC YHVGSFIQQP EHLTYQEMSI SECDVAEADW LNDEGSLWNM DEFWQFKKLG DVDI
101: HLPGRTDNEI KNYWRTRVQK QARQLKVDSN SKKFVEAIKN LWVPRLLEKM EQCSSSSSIE KKLPNLPLIN NNQEPCTKHN KSHDIAANNN NTTWGSQESS
201: LDSMHVLNEN MNSTHQYDEC YHVGSFIQQP EHLTYQEMSI SECDVAEADW LNDEGSLWNM DEFWQFKKLG DVDI
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.