Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01370_001 | Banana | nucleus | 33.12 | 82.26 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 29.22 | 70.31 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 44.16 | 69.74 |
| GSMUA_Achr10P... | Banana | nucleus | 38.64 | 68.0 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 53.9 | 66.67 |
| CDY58599 | Canola | nucleus | 21.1 | 61.32 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 34.42 | 58.24 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 53.9 | 56.85 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 53.9 | 54.79 |
| GSMUA_Achr11P... | Banana | nucleus | 50.97 | 49.84 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 28.25 | 49.71 |
| GSMUA_Achr6P27290_001 | Banana | nucleus | 29.22 | 46.15 |
| Os01t0128000-01 | Rice | nucleus | 51.95 | 45.71 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 37.01 | 44.53 |
| Solyc05g009230.1.1 | Tomato | nucleus | 39.61 | 44.53 |
| Zm00001d008528_P001 | Maize | nucleus | 52.27 | 44.48 |
| PGSC0003DMT400037716 | Potato | nucleus | 39.29 | 44.32 |
| VIT_17s0000g03560.t01 | Wine grape | nucleus | 46.75 | 43.9 |
| GSMUA_Achr1P27270_001 | Banana | nucleus | 27.92 | 43.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.99 | 43.82 |
| Bra004297.1-P | Field mustard | nucleus | 40.26 | 43.66 |
| CDX96033 | Canola | nucleus | 40.26 | 43.66 |
| Solyc03g119370.1.1 | Tomato | nucleus | 39.61 | 43.57 |
| GSMUA_Achr11P... | Banana | nucleus | 37.01 | 43.51 |
| CDY01906 | Canola | nucleus | 40.26 | 43.51 |
| PGSC0003DMT400014383 | Potato | nucleus | 38.96 | 43.17 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 37.66 | 42.96 |
| CDY69488 | Canola | nucleus | 38.64 | 42.96 |
| GSMUA_Achr11P... | Banana | nucleus | 36.69 | 42.8 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 47.73 | 42.73 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 35.71 | 42.31 |
| CDY69953 | Canola | nucleus | 38.64 | 42.2 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 47.4 | 42.2 |
| EES00381 | Sorghum | nucleus | 52.92 | 41.9 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 47.73 | 41.88 |
| Zm00001d040019_P001 | Maize | nucleus | 49.03 | 41.71 |
| AT1G68320.1 | Thale cress | nucleus | 38.64 | 41.61 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 47.4 | 41.6 |
| Bra004041.1-P | Field mustard | nucleus | 37.99 | 41.49 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 36.04 | 41.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.34 | 40.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.36 | 40.73 |
| KRH41648 | Soybean | nucleus | 40.91 | 40.38 |
| Bra033948.1-P | Field mustard | nucleus | 37.34 | 40.35 |
| Bra012482.1-P | Field mustard | nucleus | 37.01 | 40.14 |
| CDY12705 | Canola | nucleus | 37.01 | 40.0 |
| CDY54094 | Canola | nucleus | 37.01 | 40.0 |
| KRH60346 | Soybean | nucleus | 40.91 | 39.75 |
| CDY03859 | Canola | nucleus | 37.01 | 39.72 |
| CDY42115 | Canola | nucleus | 35.71 | 39.71 |
| KRH48497 | Soybean | nucleus | 39.29 | 38.91 |
| CDX84981 | Canola | nucleus | 36.36 | 38.89 |
| Bra024760.1-P | Field mustard | nucleus | 32.79 | 37.97 |
| KRH39173 | Soybean | nucleus | 37.01 | 36.77 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 32.47 | 36.76 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 24.35 | 36.76 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 34.09 | 36.59 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 36.32 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 25.0 | 35.98 |
| AT1G25340.3 | Thale cress | nucleus | 35.71 | 35.71 |
| GSMUA_Achr11P... | Banana | nucleus | 24.68 | 35.68 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 23.7 | 35.61 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 24.03 | 35.41 |
| GSMUA_Achr11P... | Banana | nucleus | 25.97 | 34.78 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 25.97 | 34.63 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 34.07 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 25.97 | 33.9 |
| GSMUA_Achr11P... | Banana | nucleus | 26.3 | 33.61 |
| GSMUA_Achr11P... | Banana | nucleus | 37.34 | 33.43 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 25.65 | 32.51 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 25.0 | 32.49 |
| GSMUA_Achr10P... | Banana | nucleus | 24.35 | 31.78 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 24.03 | 30.71 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 22.73 | 28.57 |
| GSMUA_Achr9P07000_001 | Banana | nucleus | 33.77 | 8.27 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P09760_001 | EnsemblPlants:GSMUA_Achr6T09760_001 | EnsemblPlantsGene:GSMUA_Achr6G09760_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002949418 | UniProt:M0T5M5 | MapMan:15.5.2.1 | : | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G09760_001]
Coordinates
chr6:+:6572824..6574343
Molecular Weight (calculated)
35358.3 Da
IEP (calculated)
6.888
GRAVY (calculated)
-0.745
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MSETRGSHSK HEDMELLNRG PWTVEEDKLL THYIACHGEG RWNLLARCSG LRRTGKSCRL RWLNYLKPDV RRGNLTPEEQ LLILELHSKW GNRWSRIAQH
101: LPGRTDNEIK NYWRTRVQKQ ARQLKVDANS SKFRDAVRCY WMPRLLQKFG SSQTMQYSLE ANTNTTTSDQ VQHRPCQEII NPSMQYCQLG SSSSHEPQAP
201: ENHSAVFPPL PVNMSEFPWR ASDEIHGVAF NIFSSGFSMN NAYDLGTCDL TPVSASAPIY WDLDYGTDNN DCSNYNGDNL WSMDELCDML KSYVSGADIK
301: VPFSDHNS
101: LPGRTDNEIK NYWRTRVQKQ ARQLKVDANS SKFRDAVRCY WMPRLLQKFG SSQTMQYSLE ANTNTTTSDQ VQHRPCQEII NPSMQYCQLG SSSSHEPQAP
201: ENHSAVFPPL PVNMSEFPWR ASDEIHGVAF NIFSSGFSMN NAYDLGTCDL TPVSASAPIY WDLDYGTDNN DCSNYNGDNL WSMDELCDML KSYVSGADIK
301: VPFSDHNS
001: MENSMKKKKS FKESEDEELR RGPWTLEEDT LLTNYILHNG EGRWNHVAKC AGLKRTGKSC RLRWLNYLKP DIRRGNLTPQ EQLLILELHS KWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
101: QYLPGRTDNE IKNYWRTRVQ KQARQLNIES NSDKFFDAVR SFWVPRLIEK MEQNSSTTTT YCCPQNNNNN SLLLPSQSHD SLSMQKDIDY SGFSNIDGSS
201: STSTCMSHLT TVPHFMDQSN TNIIDGSMCF HEGNVQEFGG YVPGMEDYMV NSDISMECHV ADGYSAYEDV TQDPMWNVDD IWQFRE
Arabidopsis Description
MYB62Transcription factor MYB62 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.