Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01370_001 | Banana | nucleus | 59.43 | 50.81 |
| GSMUA_Achr10P... | Banana | nucleus | 64.15 | 38.86 |
| Bra012482.1-P | Field mustard | nucleus | 92.45 | 34.51 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 63.21 | 34.36 |
| CDY03859 | Canola | nucleus | 91.51 | 33.8 |
| CDY42115 | Canola | nucleus | 82.08 | 31.41 |
| CDX84981 | Canola | nucleus | 83.96 | 30.9 |
| CDX85422 | Canola | nucleus | 52.83 | 30.6 |
| CDX86220 | Canola | nucleus | 52.83 | 29.02 |
| AT1G25340.3 | Thale cress | nucleus | 81.13 | 27.92 |
| CDY37512 | Canola | nucleus | 52.83 | 27.86 |
| CDY49063 | Canola | nucleus | 53.77 | 27.54 |
| CDX91944 | Canola | nucleus | 52.83 | 27.05 |
| CDX74303 | Canola | nucleus | 52.83 | 26.92 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 62.26 | 26.51 |
| CDY69488 | Canola | nucleus | 68.87 | 26.35 |
| CDX96033 | Canola | nucleus | 69.81 | 26.06 |
| CDY69953 | Canola | nucleus | 68.87 | 25.89 |
| CDY20036 | Canola | nucleus | 56.6 | 25.86 |
| CDY01906 | Canola | nucleus | 68.87 | 25.61 |
| CDY44433 | Canola | nucleus | 55.66 | 25.43 |
| CDX86471 | Canola | nucleus | 55.66 | 25.43 |
| CDY12705 | Canola | nucleus | 66.04 | 24.56 |
| CDY54094 | Canola | nucleus | 65.09 | 24.21 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 65.09 | 23.96 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 63.21 | 22.95 |
| CDX95420 | Canola | nucleus | 50.0 | 22.84 |
| KRG90844 | Soybean | nucleus | 66.04 | 22.8 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 65.09 | 22.77 |
| KRH35934 | Soybean | nucleus | 66.04 | 22.73 |
| PGSC0003DMT400014383 | Potato | nucleus | 58.49 | 22.3 |
| CDY00146 | Canola | nucleus | 34.91 | 22.29 |
| Solyc03g119370.1.1 | Tomato | nucleus | 58.49 | 22.14 |
| GSMUA_Achr11P... | Banana | nucleus | 64.15 | 21.59 |
| CDX77436 | Canola | nucleus | 52.83 | 21.54 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 61.32 | 21.1 |
| CDX88722 | Canola | nucleus | 48.11 | 21.07 |
| CDY49231 | Canola | nucleus | 52.83 | 20.9 |
| CDY70097 | Canola | nucleus | 46.23 | 20.76 |
| CDX71075 | Canola | nucleus | 47.17 | 20.75 |
| CDY61190 | Canola | nucleus | 50.94 | 20.69 |
| CDY49581 | Canola | nucleus | 46.23 | 20.68 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 66.04 | 20.35 |
| CDX80230 | Canola | nucleus | 45.28 | 20.25 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 66.04 | 20.23 |
| CDX94829 | Canola | nucleus | 51.89 | 20.15 |
| CDX93006 | Canola | nucleus | 51.89 | 20.07 |
| Os01t0128000-01 | Rice | nucleus | 66.04 | 20.0 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 66.04 | 19.94 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 66.04 | 19.94 |
| CDY27504 | Canola | nucleus | 50.94 | 19.85 |
| CDY64694 | Canola | nucleus | 50.94 | 19.71 |
| Zm00001d008528_P001 | Maize | nucleus | 66.98 | 19.61 |
| CDY45895 | Canola | nucleus | 47.17 | 19.46 |
| Zm00001d040019_P001 | Maize | nucleus | 66.04 | 19.34 |
| CDX86354 | Canola | nucleus | 48.11 | 19.03 |
| CDX85285 | Canola | nucleus | 48.11 | 18.89 |
| CDY00083 | Canola | nucleus | 48.11 | 18.89 |
| CDY19978 | Canola | nucleus | 47.17 | 18.73 |
| CDY13311 | Canola | nucleus | 42.45 | 18.44 |
| CDX73572 | Canola | nucleus | 42.45 | 18.37 |
| CDX78153 | Canola | nucleus | 42.45 | 18.37 |
| CDX86040 | Canola | nucleus | 48.11 | 18.35 |
| CDX86041 | Canola | nucleus | 48.11 | 18.35 |
| CDX99125 | Canola | nucleus | 48.11 | 18.35 |
| CDX67561 | Canola | nucleus | 41.51 | 18.33 |
| EES00381 | Sorghum | nucleus | 66.98 | 18.25 |
| CDY33891 | Canola | nucleus | 54.72 | 18.24 |
| CDY05611 | Canola | nucleus | 54.72 | 18.24 |
| CDY24688 | Canola | nucleus | 52.83 | 17.55 |
| CDY05270 | Canola | nucleus | 52.83 | 17.39 |
| CDX99864 | Canola | nucleus | 51.89 | 17.19 |
| CDY34949 | Canola | nucleus | 51.89 | 17.19 |
| CDX80085 | Canola | nucleus | 27.36 | 14.57 |
| CDY70282 | Canola | nucleus | 36.79 | 13.27 |
| CDX74100 | Canola | nucleus | 33.96 | 10.68 |
| CDY35782 | Canola | nucleus | 16.98 | 8.78 |
| CDY58600 | Canola | nucleus | 19.81 | 6.5 |
| CDX86221 | Canola | nucleus | 1.89 | 2.86 |
Protein Annotations
| EnsemblPlants:CDY58599 | EnsemblPlantsGene:GSBRNA2T00024885001 | Gene3D:1.10.10.60 | GO:A0A078J6G3 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF510 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY58599 | ProteinID:CDY58599.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEBDC6 | UniProt:A0A078J6G3 | MapMan:15.5.2.1 | : |
Description
BnaA07g36940DBnaA07g36940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J6G3]
Coordinates
chrLK033682:+:34534..35365
Molecular Weight (calculated)
12182.7 Da
IEP (calculated)
9.935
GRAVY (calculated)
-0.712
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNIMKKRCN ENEESAEQRK GPWTLEEDTL LTNYIAHNGE GRWNLLAKSS GLKRKGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHCK WGNSGSFVKA
101: GDLLVL
101: GDLLVL
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.