Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024760.1-P | Field mustard | nucleus | 95.67 | 99.62 |
| CDX84981 | Canola | nucleus | 96.75 | 93.06 |
| CDY58599 | Canola | nucleus | 31.41 | 82.08 |
| CDY03859 | Canola | nucleus | 83.75 | 80.84 |
| GSMUA_Achr3P01370_001 | Banana | nucleus | 32.49 | 72.58 |
| AT1G25340.3 | Thale cress | nucleus | 76.9 | 69.16 |
| CDY69488 | Canola | nucleus | 62.09 | 62.09 |
| CDY69953 | Canola | nucleus | 62.09 | 60.99 |
| CDX96033 | Canola | nucleus | 59.93 | 58.45 |
| CDY12705 | Canola | nucleus | 59.21 | 57.54 |
| CDY01906 | Canola | nucleus | 58.84 | 57.19 |
| CDY54094 | Canola | nucleus | 57.76 | 56.14 |
| GSMUA_Achr10P... | Banana | nucleus | 35.02 | 55.43 |
| CDX85422 | Canola | nucleus | 34.66 | 52.46 |
| CDY58600 | Canola | nucleus | 61.01 | 52.32 |
| GSMUA_Achr1P21020_001 | Banana | nucleus | 35.38 | 50.26 |
| CDX86220 | Canola | nucleus | 34.66 | 49.74 |
| CDY37512 | Canola | nucleus | 31.77 | 43.78 |
| GSMUA_Achr8P18460_001 | Banana | nucleus | 39.35 | 43.78 |
| CDY00146 | Canola | nucleus | 25.99 | 43.37 |
| CDY49063 | Canola | nucleus | 31.77 | 42.51 |
| Solyc03g119370.1.1 | Tomato | nucleus | 42.96 | 42.5 |
| VIT_01s0011g03730.t01 | Wine grape | nucleus | 44.04 | 42.36 |
| PGSC0003DMT400014383 | Potato | nucleus | 42.24 | 42.09 |
| CDX91944 | Canola | nucleus | 31.05 | 41.55 |
| CDX95420 | Canola | nucleus | 34.66 | 41.38 |
| CDY44433 | Canola | nucleus | 34.3 | 40.95 |
| CDX86471 | Canola | nucleus | 34.3 | 40.95 |
| CDX74303 | Canola | nucleus | 30.69 | 40.87 |
| CDY20036 | Canola | nucleus | 33.57 | 40.09 |
| KRG90844 | Soybean | nucleus | 44.4 | 40.07 |
| KRH35934 | Soybean | nucleus | 43.32 | 38.96 |
| CDY27504 | Canola | nucleus | 37.91 | 38.6 |
| GSMUA_Achr2P22640_001 | Banana | nucleus | 40.07 | 38.01 |
| GSMUA_Achr3P21060_001 | Banana | nucleus | 41.16 | 37.62 |
| CDX80085 | Canola | nucleus | 25.99 | 36.18 |
| GSMUA_Achr6P09760_001 | Banana | nucleus | 39.71 | 35.71 |
| GSMUA_Achr11P... | Banana | nucleus | 39.71 | 34.92 |
| CDY70097 | Canola | nucleus | 28.88 | 33.9 |
| CDX80230 | Canola | nucleus | 28.88 | 33.76 |
| CDY49581 | Canola | nucleus | 28.88 | 33.76 |
| CDY05611 | Canola | nucleus | 38.63 | 33.65 |
| CDY33891 | Canola | nucleus | 38.63 | 33.65 |
| CDX71075 | Canola | nucleus | 28.52 | 32.78 |
| Os01t0128000-01 | Rice | nucleus | 41.16 | 32.57 |
| CDX99864 | Canola | nucleus | 37.55 | 32.5 |
| CDY34949 | Canola | nucleus | 37.55 | 32.5 |
| Zm00001d040019_P001 | Maize | nucleus | 42.24 | 32.32 |
| CDX77436 | Canola | nucleus | 30.32 | 32.31 |
| CDY05270 | Canola | nucleus | 37.55 | 32.3 |
| CDY24688 | Canola | nucleus | 37.18 | 32.29 |
| CDX88722 | Canola | nucleus | 28.16 | 32.23 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 39.71 | 31.98 |
| HORVU3Hr1G004050.1 | Barley | nucleus | 40.43 | 31.91 |
| TraesCS3A01G044700.1 | Wheat | nucleus | 39.71 | 31.79 |
| Zm00001d008528_P001 | Maize | nucleus | 41.52 | 31.77 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 40.07 | 31.62 |
| CDY61190 | Canola | nucleus | 29.6 | 31.42 |
| CDY49231 | Canola | nucleus | 29.96 | 30.97 |
| CDY70282 | Canola | nucleus | 32.49 | 30.61 |
| CDY64694 | Canola | nucleus | 29.96 | 30.29 |
| CDX93006 | Canola | nucleus | 29.6 | 29.93 |
| CDX99125 | Canola | nucleus | 29.96 | 29.86 |
| CDX86041 | Canola | nucleus | 29.96 | 29.86 |
| CDX86040 | Canola | nucleus | 29.96 | 29.86 |
| CDX94829 | Canola | nucleus | 29.24 | 29.67 |
| EES00381 | Sorghum | nucleus | 41.52 | 29.56 |
| CDY00083 | Canola | nucleus | 28.52 | 29.26 |
| CDY19978 | Canola | nucleus | 28.16 | 29.21 |
| CDY45895 | Canola | nucleus | 27.08 | 29.18 |
| CDX86354 | Canola | nucleus | 28.16 | 29.1 |
| CDX85285 | Canola | nucleus | 28.16 | 28.89 |
| CDX67561 | Canola | nucleus | 24.91 | 28.75 |
| CDY13311 | Canola | nucleus | 25.27 | 28.69 |
| CDX78153 | Canola | nucleus | 24.91 | 28.16 |
| CDX73572 | Canola | nucleus | 24.91 | 28.16 |
| CDX74100 | Canola | nucleus | 31.41 | 25.82 |
| CDY35782 | Canola | nucleus | 15.88 | 21.46 |
| CDX86221 | Canola | nucleus | 2.53 | 10.0 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HUE3 | UniProt:A0A078HUE3 | EnsemblPlants:CDY42115 | ProteinID:CDY42115 |
| ProteinID:CDY42115.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00074286001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF510 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE603B | : |
Description
BnaA09g28450DBnaA09g28450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUE3]
Coordinates
chrLK032515:-:201899..203050
Molecular Weight (calculated)
32201.7 Da
IEP (calculated)
5.875
GRAVY (calculated)
-0.864
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKRCNENEE GVEQRKGPWT LEEDTILTNY ISHNGEGRWN VLAKSSGLKR KGKSCRLRWL NYLKPDIKRG NLTPQEQLLI LELHCQWGNR WSKIAQYLPG
101: RTDNEIKNYW RTRVQKQARQ LNIDSSSHQF LEAVRSFWVP RLIHKMKDNS NTNTKTPHPD SLGPVSHDSG FNMGCSTSMS QELTEMSQFI DLSDLETTNL
201: MSLKGSRGSS NQCVSEEYYS SLPCLEEEYM VPTMGNSDIL PFKDCHVADS SYEEDVTQDP MWNMDDIWQF EEYAHFN
101: RTDNEIKNYW RTRVQKQARQ LNIDSSSHQF LEAVRSFWVP RLIHKMKDNS NTNTKTPHPD SLGPVSHDSG FNMGCSTSMS QELTEMSQFI DLSDLETTNL
201: MSLKGSRGSS NQCVSEEYYS SLPCLEEEYM VPTMGNSDIL PFKDCHVADS SYEEDVTQDP MWNMDDIWQF EEYAHFN
001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN
Arabidopsis Description
MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.