Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001941.1-P | Field mustard | nucleus | 95.97 | 95.62 |
| CDX93006 | Canola | nucleus | 95.97 | 95.62 |
| CDY49231 | Canola | nucleus | 83.88 | 85.45 |
| CDX77436 | Canola | nucleus | 80.95 | 85.0 |
| KRH62917 | Soybean | nucleus | 32.23 | 84.62 |
| AT3G24310.1 | Thale cress | nucleus | 83.15 | 84.39 |
| KRH55348 | Soybean | nucleus | 38.1 | 83.87 |
| CDY61190 | Canola | nucleus | 79.49 | 83.14 |
| KRH11843 | Soybean | nucleus | 37.73 | 83.06 |
| CDY64694 | Canola | nucleus | 83.15 | 82.85 |
| KRH33348 | Soybean | nucleus | 30.4 | 81.37 |
| KRH75688 | Soybean | nucleus | 31.14 | 78.7 |
| PGSC0003DMT400069955 | Potato | nucleus | 52.01 | 62.01 |
| Solyc05g053150.1.1 | Tomato | nucleus | 50.55 | 60.26 |
| VIT_05s0049g02260.t01 | Wine grape | nucleus | 53.85 | 57.42 |
| KRG90311 | Soybean | nucleus | 54.21 | 56.92 |
| PGSC0003DMT400003796 | Potato | nucleus | 52.38 | 56.52 |
| Solyc09g090790.2.1 | Tomato | nucleus | 51.65 | 56.18 |
| KRG92245 | Soybean | nucleus | 52.01 | 55.91 |
| KRH34553 | Soybean | nucleus | 54.21 | 55.64 |
| KRH04452 | Soybean | nucleus | 53.85 | 55.47 |
| CDY58599 | Canola | nucleus | 20.15 | 51.89 |
| GSMUA_Achr4P29230_001 | Banana | nucleus | 38.1 | 50.98 |
| GSMUA_Achr11P... | Banana | nucleus | 39.56 | 50.7 |
| GSMUA_Achr11P... | Banana | nucleus | 41.03 | 48.7 |
| GSMUA_Achr8P12710_001 | Banana | nucleus | 40.29 | 47.62 |
| KRH33568 | Soybean | nucleus | 54.95 | 46.88 |
| GSMUA_Achr1P03450_001 | Banana | nucleus | 41.39 | 46.5 |
| HORVU0Hr1G005100.1 | Barley | nucleus | 37.73 | 45.78 |
| TraesCS2A01G363800.1 | Wheat | nucleus | 42.49 | 44.62 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 42.12 | 44.57 |
| HORVU2Hr1G087990.1 | Barley | nucleus | 42.12 | 44.4 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 41.76 | 44.36 |
| KXG26684 | Sorghum | nucleus | 45.79 | 44.33 |
| HORVU6Hr1G057670.3 | Barley | nucleus | 43.59 | 44.07 |
| Zm00001d017243_P001 | Maize | nucleus | 44.69 | 43.42 |
| Zm00001d048383_P001 | Maize | nucleus | 36.63 | 43.1 |
| TraesCS6A01G227700.1 | Wheat | nucleus | 43.22 | 43.07 |
| Os03t0142600-00 | Rice | nucleus | 38.83 | 42.91 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 42.86 | 42.7 |
| CDX85422 | Canola | nucleus | 28.57 | 42.62 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 42.86 | 42.55 |
| Zm00001d025823_P001 | Maize | nucleus | 43.22 | 42.45 |
| EES07157 | Sorghum | nucleus | 44.69 | 42.36 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 38.1 | 42.28 |
| Os02t0618400-02 | Rice | nucleus | 44.69 | 42.21 |
| Zm00001d027623_P001 | Maize | nucleus | 38.1 | 41.77 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 37.73 | 41.7 |
| Os04t0508500-01 | Rice | nucleus | 42.86 | 41.64 |
| TraesCS5A01G512700.1 | Wheat | nucleus | 37.73 | 41.53 |
| EER92876 | Sorghum | nucleus | 38.1 | 41.11 |
| CDX86220 | Canola | nucleus | 28.57 | 40.41 |
| HORVU4Hr1G084360.3 | Barley | nucleus | 38.83 | 39.41 |
| CDX86354 | Canola | nucleus | 38.46 | 39.18 |
| CDY19978 | Canola | nucleus | 38.1 | 38.95 |
| CDX85285 | Canola | nucleus | 38.46 | 38.89 |
| CDY00083 | Canola | nucleus | 38.46 | 38.89 |
| CDY00146 | Canola | nucleus | 23.44 | 38.55 |
| CDY37512 | Canola | nucleus | 27.84 | 37.81 |
| CDY45895 | Canola | nucleus | 35.53 | 37.74 |
| CDY49063 | Canola | nucleus | 27.84 | 36.72 |
| Zm00001d051117_P001 | Maize | nucleus | 37.0 | 36.2 |
| CDX91944 | Canola | nucleus | 27.11 | 35.75 |
| CDY20036 | Canola | nucleus | 30.04 | 35.34 |
| CDX74303 | Canola | nucleus | 26.74 | 35.1 |
| CDX86471 | Canola | nucleus | 29.67 | 34.91 |
| CDY44433 | Canola | nucleus | 29.67 | 34.91 |
| CDX95420 | Canola | nucleus | 28.94 | 34.05 |
| CDX71075 | Canola | nucleus | 29.3 | 33.2 |
| CDX88722 | Canola | nucleus | 29.3 | 33.06 |
| CDY70097 | Canola | nucleus | 28.57 | 33.05 |
| CDX67561 | Canola | nucleus | 28.94 | 32.92 |
| CDX78153 | Canola | nucleus | 28.94 | 32.24 |
| CDY49581 | Canola | nucleus | 27.84 | 32.07 |
| CDY13311 | Canola | nucleus | 28.57 | 31.97 |
| CDX73572 | Canola | nucleus | 28.57 | 31.84 |
| CDX80230 | Canola | nucleus | 27.47 | 31.65 |
| CDY69488 | Canola | nucleus | 31.87 | 31.41 |
| CDY69953 | Canola | nucleus | 31.87 | 30.85 |
| CDX96033 | Canola | nucleus | 31.5 | 30.28 |
| CDY27504 | Canola | nucleus | 30.04 | 30.15 |
| CDY01906 | Canola | nucleus | 31.14 | 29.82 |
| CDY12705 | Canola | nucleus | 31.14 | 29.82 |
| CDY54094 | Canola | nucleus | 31.14 | 29.82 |
| CDY35782 | Canola | nucleus | 22.34 | 29.76 |
| CDY03859 | Canola | nucleus | 31.14 | 29.62 |
| CDY42115 | Canola | nucleus | 29.67 | 29.24 |
| CDX84981 | Canola | nucleus | 30.4 | 28.82 |
| CDX80085 | Canola | nucleus | 20.88 | 28.64 |
| CDY05611 | Canola | nucleus | 32.97 | 28.3 |
| CDY33891 | Canola | nucleus | 32.97 | 28.3 |
| CDX86040 | Canola | nucleus | 28.21 | 27.7 |
| CDX86041 | Canola | nucleus | 28.21 | 27.7 |
| CDX99125 | Canola | nucleus | 28.21 | 27.7 |
| CDY24688 | Canola | nucleus | 32.23 | 27.59 |
| CDY05270 | Canola | nucleus | 32.23 | 27.33 |
| CDX99864 | Canola | nucleus | 31.87 | 27.19 |
| CDY34949 | Canola | nucleus | 31.87 | 27.19 |
| CDY70282 | Canola | nucleus | 24.54 | 22.79 |
| CDX74100 | Canola | nucleus | 23.81 | 19.29 |
| CDY58600 | Canola | nucleus | 17.58 | 14.86 |
| CDX86221 | Canola | nucleus | 1.1 | 4.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078E2I1 | EnsemblPlants:CDX94829 | ProteinID:CDX94829 | ProteinID:CDX94829.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00158332001 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF574 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEC704 | SEG:seg | : |
Description
BnaC03g43590D
Coordinates
chrLK031885:+:356885..357809
Molecular Weight (calculated)
31281.9 Da
IEP (calculated)
9.595
GRAVY (calculated)
-0.766
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLWGVMGGG WGLVEEGWRK GPWTAEEDRL LIDYVRLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPYE EIIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRILKRQ QFQQQRRMEL QQEQQLLQFN QIDVNKIMSL LDDNNNYNDF SSSSSGSSGE GGAFYVPHQI
201: KIPTPNSGHD PNGNGFCPVV PAPTVEANVN EDFAIWNGIW NLDLEGQGSF GDGACVPRKH CFQNWPIPSN LTF
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNNAE KTKNRILKRQ QFQQQRRMEL QQEQQLLQFN QIDVNKIMSL LDDNNNYNDF SSSSSGSSGE GGAFYVPHQI
201: KIPTPNSGHD PNGNGFCPVV PAPTVEANVN EDFAIWNGIW NLDLEGQGSF GDGACVPRKH CFQNWPIPSN LTF
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.