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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027623_P001 Maize nucleus 91.3 92.77
Zm00001d048383_P001 Maize nucleus 84.19 91.81
Os03t0142600-00 Rice nucleus 79.45 81.38
TraesCS4B01G344000.1 Wheat nucleus 73.12 75.2
TraesCS5A01G512700.1 Wheat nucleus 72.73 74.19
TraesCS4D01G339100.1 Wheat nucleus 71.94 73.68
KRH62917 Soybean nucleus 28.85 70.19
HORVU4Hr1G084360.3 Barley nucleus 71.94 67.66
KRH55348 Soybean nucleus 32.81 66.94
KRH11843 Soybean nucleus 32.41 66.13
KRH33348 Soybean nucleus 26.48 65.69
KRH75688 Soybean nucleus 26.88 62.96
GSMUA_Achr4P29230_001 Banana nucleus 41.11 50.98
GSMUA_Achr11P... Banana nucleus 40.71 48.36
VIT_05s0049g02260.t01 Wine grape nucleus 48.22 47.66
GSMUA_Achr8P12710_001 Banana nucleus 41.9 45.89
GSMUA_Achr11P... Banana nucleus 41.5 45.65
KRH04452 Soybean nucleus 47.43 45.28
GSMUA_Achr1P03450_001 Banana nucleus 43.08 44.86
KRG90311 Soybean nucleus 45.45 44.23
Solyc09g090790.2.1 Tomato nucleus 43.48 43.82
PGSC0003DMT400069955 Potato nucleus 39.53 43.67
PGSC0003DMT400003796 Potato nucleus 43.48 43.48
KRH34553 Soybean nucleus 45.45 43.23
Solyc05g053150.1.1 Tomato nucleus 38.74 42.79
KRG92245 Soybean nucleus 42.69 42.52
VIT_14s0083g01060.t01 Wine grape nucleus 40.71 41.7
CDX77436 Canola nucleus 41.9 40.77
AT4G13480.1 Thale cress nucleus 41.5 40.23
AT3G24310.1 Thale cress nucleus 42.69 40.15
KXG26684 Sorghum nucleus 44.66 40.07
EES07157 Sorghum nucleus 45.45 39.93
CDY61190 Canola nucleus 41.11 39.85
CDY49231 Canola nucleus 41.9 39.55
Bra015029.1-P Field mustard nucleus 41.9 39.11
CDX93006 Canola nucleus 41.5 38.32
Bra001941.1-P Field mustard nucleus 41.5 38.32
CDX94829 Canola nucleus 41.11 38.1
Solyc02g089190.1.1 Tomato nucleus 35.97 38.08
CDY64694 Canola nucleus 41.11 37.96
Bra028369.1-P Field mustard nucleus 41.11 37.96
PGSC0003DMT400003479 Potato nucleus 35.57 37.82
KRH33568 Soybean nucleus 47.83 37.81
CDX86354 Canola nucleus 39.92 37.69
Bra025410.1-P Field mustard nucleus 39.92 37.69
Bra020744.1-P Field mustard nucleus 37.94 37.35
CDY45895 Canola nucleus 37.94 37.35
KRH45095 Soybean nucleus 39.53 36.36
CDX85285 Canola nucleus 38.74 36.3
KRH01379 Soybean nucleus 36.36 35.66
AT3G30210.1 Thale cress nucleus 38.74 35.51
KRH01378 Soybean nucleus 39.13 35.48
CDY00083 Canola nucleus 37.15 34.81
CDY19978 Canola nucleus 36.36 34.46
Bra036202.1-P Field mustard nucleus 36.36 34.46
KXG23736 Sorghum nucleus 30.04 31.67
KXG29192 Sorghum nucleus 27.67 30.7
CDY35782 Canola nucleus 22.13 27.32
OQU77249 Sorghum nucleus 31.23 25.65
KXG29190 Sorghum nucleus 21.34 25.47
EES01143 Sorghum nucleus 29.25 25.26
EES00624 Sorghum nucleus 30.43 25.16
KXG39500 Sorghum nucleus 31.23 23.51
EES17592 Sorghum nucleus 30.83 23.35
KXG36991 Sorghum nucleus 30.83 22.81
EES17207 Sorghum nucleus 28.46 21.36
EES00381 Sorghum nucleus 32.81 21.34
EES10257 Sorghum nucleus 30.04 20.82
KXG21220 Sorghum nucleus 31.62 19.7
KXG21221 Sorghum nucleus 32.41 17.19
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.2.1EntrezGene:8085503UniProt:C5WYU8ncoils:CoilEnsemblPlants:EER92876
ProteinID:EER92876ProteinID:EER92876.1GO:GO:0000981GO:GO:0001135GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006357GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0030154GO:GO:0043565GO:GO:0044212InterPro:Homeobox-like_sfInterPro:IPR017930
InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF539InterPro:SANT/Myb
SMART:SM00717EnsemblPlantsGene:SORBI_3001G508400SUPFAM:SSF46689UniParc:UPI0001A82BC3RefSeq:XP_002465878.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:+:77641217..77643080
Molecular Weight (calculated)
29143.6 Da
IEP (calculated)
6.995
GRAVY (calculated)
-0.786
Length
253 amino acids
Sequence
(BLAST)
001: MDAISSLMLQ EGWRKGPWTA LEDRLLTEYV QQHGEGSWNS VAKLTGLRRS GKSCRLRWVN YLRPDLKRGK ITPDEETVIL QLHAMLGNRW SAIARCLPGR
101: TDNEIKNYWR THFKKARPSR RARAQLLHQY QLQQQEQRRQ YLQSLQLLQQ QQQQQQEMLL QQQNQQQLVV KQQQLEQQSP PESDHQAVMA MMDSLQSTAE
201: CYCSPVSPMM SVPVPEQCCA LPADDDAMLW DSLWRLVDGE GCGDGDGSSG GEY
Best Arabidopsis Sequence Match ( AT3G24310.1 )
(BLAST)
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.