Factsheet for Bra025410.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86354	Canola	nucleus	100.0	100.0
Bra036202.1-P	Field mustard	nucleus	79.1	79.4
Bra020744.1-P	Field mustard	nucleus	75.75	78.99
AT3G30210.1	Thale cress	nucleus	74.63	72.46
PGSC0003DMT400003479	Potato	nucleus	46.64	52.52
Solyc02g089190.1.1	Tomato	nucleus	45.9	51.46
VIT_14s0083g01060.t01	Wine grape	nucleus	47.39	51.42
KRH01379	Soybean	nucleus	45.52	47.29
GSMUA_Achr11P...	Banana	nucleus	36.94	46.48
GSMUA_Achr4P29230_001	Banana	nucleus	35.07	46.08
KRH45095	Soybean	nucleus	45.52	44.36
Zm00001d048383_P001	Maize	nucleus	37.69	43.53
GSMUA_Achr11P...	Banana	nucleus	37.31	43.48
KRH01378	Soybean	nucleus	44.78	43.01
GSMUA_Achr8P12710_001	Banana	nucleus	36.94	42.86
HORVU0Hr1G005100.1	Barley	nucleus	35.45	42.22
GSMUA_Achr1P03450_001	Banana	nucleus	38.06	41.98
TraesCS2A01G363800.1	Wheat	nucleus	40.3	41.54
TraesCS2B01G381800.1	Wheat	nucleus	39.93	41.47
TraesCS2D01G361600.1	Wheat	nucleus	39.55	41.25
EES07157	Sorghum	nucleus	43.66	40.62
Zm00001d027623_P001	Maize	nucleus	37.69	40.56
HORVU2Hr1G087990.1	Barley	nucleus	39.18	40.54
Os03t0142600-00	Rice	nucleus	37.31	40.49
HORVU6Hr1G057670.3	Barley	nucleus	40.67	40.37
Bra015029.1-P	Field mustard	nucleus	40.67	40.22
Zm00001d017243_P001	Maize	nucleus	42.16	40.21
Bra028369.1-P	Field mustard	nucleus	41.04	40.15
EER92876	Sorghum	nucleus	37.69	39.92
TraesCS4B01G344000.1	Wheat	nucleus	36.57	39.84
TraesCS6B01G254200.1	Wheat	nucleus	40.3	39.42
TraesCS5A01G512700.1	Wheat	nucleus	36.19	39.11
Bra001941.1-P	Field mustard	nucleus	39.93	39.05
TraesCS6A01G227700.1	Wheat	nucleus	39.93	39.05
Zm00001d025823_P001	Maize	nucleus	40.3	38.85
Os02t0618400-02	Rice	nucleus	41.79	38.75
TraesCS6D01G207300.1	Wheat	nucleus	39.55	38.55
TraesCS4D01G339100.1	Wheat	nucleus	35.45	38.46
KXG26684	Sorghum	nucleus	39.93	37.94
Bra001005.1-P	Field mustard	nucleus	28.73	37.02
Os04t0508500-01	Rice	nucleus	38.81	37.01
HORVU4Hr1G084360.3	Barley	nucleus	36.94	36.8
Bra039108.1-P	Field mustard	nucleus	26.87	35.12
Bra020289.1-P	Field mustard	nucleus	30.22	34.32
Bra006694.1-P	Field mustard	nucleus	30.97	34.3
Zm00001d051117_P001	Maize	nucleus	34.7	33.33
Bra002533.1-P	Field mustard	nucleus	29.48	33.33
Bra028550.1-P	Field mustard	nucleus	29.1	32.5
Bra006977.1-P	Field mustard	nucleus	29.1	31.84
Bra039067.1-P	Field mustard	nucleus	26.87	31.03
Bra018223.1-P	Field mustard	nucleus	29.1	30.95
Bra025300.1-P	Field mustard	nucleus	26.12	30.17
Bra004297.1-P	Field mustard	nucleus	29.48	27.82
Bra004041.1-P	Field mustard	nucleus	29.1	27.66
Bra021389.1-P	Field mustard	nucleus	27.99	27.57
Bra012482.1-P	Field mustard	nucleus	29.1	27.46
Bra033948.1-P	Field mustard	nucleus	29.1	27.37
Bra001202.1-P	Field mustard	nucleus	30.97	27.3
Bra004473.1-P	Field mustard	nucleus	27.24	26.55
Bra024760.1-P	Field mustard	nucleus	26.12	26.32
Bra040274.1-P	Field mustard	nucleus	30.97	25.94
Bra020624.1-P	Field mustard	nucleus	30.22	25.47
Bra029582.1-P	Field mustard	nucleus	30.6	25.47
Bra010021.1-P	Field mustard	nucleus	30.22	25.08
Bra010022.1-P	Field mustard	nucleus	30.22	25.08

Protein Annotations

EnsemblPlants:Bra025410.1	EnsemblPlants:Bra025410.1-P	EnsemblPlantsGene:Bra025410	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF572	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000253FA6B	UniProt:M4E9F4	MapMan:15.5.2.1	:	:

Description

AT3G30210 (E=4e-096) ATMYB121, MYB121 | MYB121 (MYB DOMAIN PROTEIN 121); DNA binding / transcription factor

Coordinates

chrA06:-:21717227..21718850

Molecular Weight (calculated)

31149.0 Da

IEP (calculated)

8.362

GRAVY (calculated)

-1.103

Length

268 amino acids

Sequence
(BLAST)

001: MLDWGVDQVQ QRNHDLYQQQ QQQQGCRKGP WTPEEDKLLS EYVTSNGEGR WSSVAKCAGL NRSGKSCRLR WVNYLRPGLK RGQITPQEEG IILELHSLWG
101: NKWSTIARYL PGRTDNEIKN YWRTHYKKKE KSFSKQEKVK RSRKQLDLKP QSQQQPQQQN QSSQFVSEDH KKLDNEQNTF SYQTSVFFTD QFHMPQVVAA
201: TSSDHSMMDE GNLWGSLWSL DDHDPHHFGG CSEQRTASNV SEKFNGCGID APFCGSWDYS YNGFNTRL

Best Arabidopsis Sequence Match ( AT3G30210.1 )
(BLAST)

001: MLDWGVQGHH QKHDHDIYQQ QHQQQGCRKG PWTLEEDKLL AEYVTSHGEG RWSTVAKCAG LNRSGKSCRL RWVNYLRPGL KRGQITPQEE GIILELHSLW
101: GNKWSTIARY LPGRTDNEIK NYWRTHYKKN QKSSSKQDKV KKSLSRKQQQ VDLKPQPQAQ SENHQSQLVS QDHMNIDNDH NIASSLYYPT SVFDDKLYMP
201: QSVATTSSDH SMIDEGHLWG SLWNLDEDDP HSFGGGSGQG TAADIDEKFP DSGIEAPSCG SGDYSYTGVY MGGYIF

Arabidopsis Description

ATMYB121MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.