Factsheet for Bra029582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24688	Canola	nucleus	97.83	98.75
CDY05270	Canola	nucleus	97.83	97.83
AT3G06490.1	Thale cress	nucleus	88.51	88.24
Bra040274.1-P	Field mustard	nucleus	85.4	85.94
Bra001202.1-P	Field mustard	nucleus	78.88	83.55
GSMUA_Achr4P19990_001	Banana	nucleus	29.5	74.22
GSMUA_Achr5P21090_001	Banana	nucleus	39.13	69.23
Bra020624.1-P	Field mustard	nucleus	68.01	68.87
Bra010021.1-P	Field mustard	nucleus	67.08	66.87
Bra010022.1-P	Field mustard	nucleus	67.08	66.87
PGSC0003DMT400011745	Potato	nucleus	45.65	62.82
PGSC0003DMT400011750	Potato	nucleus	44.41	62.17
Solyc12g099130.1.1	Tomato	nucleus	44.1	60.43
Solyc12g099120.1.1	Tomato	nucleus	45.96	59.92
PGSC0003DMT400022600	Potato	nucleus	54.04	58.59
Solyc01g057910.2.1	Tomato	nucleus	51.86	58.19
VIT_05s0077g00500.t01	Wine grape	nucleus	54.66	57.52
GSMUA_Achr3P12730_001	Banana	nucleus	30.12	55.43
GSMUA_Achr11P...	Banana	nucleus	44.41	54.58
GSMUA_Achr8P10800_001	Banana	nucleus	43.17	54.3
GSMUA_Achr9P16640_001	Banana	nucleus	43.17	53.46
GSMUA_Achr11P...	Banana	nucleus	43.79	53.41
GSMUA_AchrUn_...	Banana	nucleus	44.72	51.25
PGSC0003DMT400011748	Potato	nucleus	46.58	50.85
GSMUA_Achr1P24960_001	Banana	nucleus	42.55	50.74
GSMUA_AchrUn_...	Banana	nucleus	41.93	50.56
GSMUA_Achr8P29910_001	Banana	nucleus	42.24	50.56
Solyc12g099140.1.1	Tomato	nucleus	46.27	49.67
Solyc05g053330.2.1	Tomato	nucleus	48.14	48.74
PGSC0003DMT400069841	Potato	nucleus	47.83	47.53
Bra039108.1-P	Field mustard	nucleus	29.5	46.34
Bra004473.1-P	Field mustard	nucleus	39.44	46.18
Bra021389.1-P	Field mustard	nucleus	38.51	45.59
TraesCSU01G069000.1	Wheat	nucleus	40.99	45.52
GSMUA_AchrUn_...	Banana	nucleus	38.82	45.45
TraesCS4D01G181100.1	Wheat	nucleus	45.03	45.45
TraesCS4A01G124900.1	Wheat	nucleus	45.03	45.45
TraesCS4B01G179500.1	Wheat	nucleus	44.72	45.28
TraesCS4D01G142900.1	Wheat	nucleus	40.99	45.05
TraesCS4A01G172200.1	Wheat	nucleus	40.37	44.98
Bra001005.1-P	Field mustard	nucleus	28.88	44.71
HORVU4Hr1G028780.1	Barley	nucleus	40.68	44.71
TraesCS5D01G099100.1	Wheat	nucleus	37.89	43.88
TraesCS5A01G087100.1	Wheat	nucleus	37.89	43.88
TraesCS5B01G093000.1	Wheat	nucleus	37.89	43.88
TraesCS3D01G413700.1	Wheat	nucleus	39.75	43.69
HORVU5Hr1G022690.1	Barley	nucleus	37.89	43.26
GSMUA_Achr7P05570_001	Banana	nucleus	36.02	42.65
TraesCS1D01G078600.1	Wheat	nucleus	42.55	42.41
TraesCS1A01G076200.1	Wheat	nucleus	42.55	42.28
EES00624	Sorghum	nucleus	40.06	42.16
TraesCS3D01G014800.1	Wheat	nucleus	36.34	42.09
KXG39500	Sorghum	nucleus	43.79	41.96
HORVU1Hr1G016420.1	Barley	nucleus	42.24	41.85
Bra039067.1-P	Field mustard	nucleus	30.12	41.81
TraesCS3B01G453300.1	Wheat	nucleus	39.75	41.69
Zm00001d028930_P001	Maize	nucleus	43.48	41.67
TraesCS1B01G094500.1	Wheat	nucleus	41.93	41.41
TraesCS3A01G418100.1	Wheat	nucleus	39.44	41.23
Bra025300.1-P	Field mustard	nucleus	29.5	40.95
Zm00001d040594_P001	Maize	nucleus	38.2	40.59
GSMUA_Achr3P08370_001	Banana	nucleus	35.71	40.07
Zm00001d047579_P001	Maize	nucleus	43.17	39.83
GSMUA_Achr11P...	Banana	nucleus	42.24	39.53
KXG36991	Sorghum	nucleus	41.3	38.89
HORVU4Hr1G052490.5	Barley	nucleus, plastid	44.41	38.75
Bra004297.1-P	Field mustard	nucleus	33.85	38.38
HORVU3Hr1G092820.1	Barley	nucleus	39.13	38.07
Bra004041.1-P	Field mustard	nucleus	33.23	37.94
Zm00001d007191_P001	Maize	nucleus	40.68	37.75
Zm00001d009066_P001	Maize	nucleus	37.27	37.74
Bra012482.1-P	Field mustard	nucleus	33.23	37.68
Bra033948.1-P	Field mustard	nucleus	32.61	36.84
TraesCS2A01G097200.1	Wheat	nucleus	36.02	35.58
Zm00001d048647_P001	Maize	nucleus	38.82	35.51
Zm00001d010933_P001	Maize	nucleus	40.37	35.42
TraesCS2D01G096000.1	Wheat	nucleus	36.02	35.37
TraesCS2B01G112600.1	Wheat	nucleus	36.34	35.24
EES17207	Sorghum	nucleus	36.34	34.72
Bra024760.1-P	Field mustard	nucleus	28.57	34.59
EES10257	Sorghum	nucleus	38.82	34.25
Zm00001d030644_P001	Maize	nucleus	37.27	34.19
Bra015029.1-P	Field mustard	nucleus	28.57	33.95
Bra020289.1-P	Field mustard	nucleus	24.84	33.9
Zm00001d024726_P001	Maize	nucleus	36.34	32.96
Bra002533.1-P	Field mustard	nucleus	24.22	32.91
Os05t0132700-01	Rice	nucleus	21.74	32.56
Bra001941.1-P	Field mustard	nucleus	27.64	32.48
Bra006694.1-P	Field mustard	nucleus	24.22	32.23
Bra028369.1-P	Field mustard	nucleus	27.02	31.75
HORVU2Hr1G016380.1	Barley	nucleus	35.71	31.68
Bra018223.1-P	Field mustard	nucleus	24.53	31.35
Zm00001d024725_P001	Maize	nucleus	39.13	31.03
KXG21220	Sorghum	nucleus	39.13	31.03
Bra025410.1-P	Field mustard	nucleus	25.47	30.6
Bra020744.1-P	Field mustard	nucleus	24.22	30.35
Bra006977.1-P	Field mustard	nucleus	22.67	29.8
Bra028550.1-P	Field mustard	nucleus	22.05	29.58
Bra036202.1-P	Field mustard	nucleus	23.91	28.84
KXG21221	Sorghum	nucleus	38.2	25.79

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EnsemblPlantsGene:Bra029582	EnsemblPlants:Bra029582.1	EnsemblPlants:Bra029582.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009620
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009723	GO:GO:0009737	GO:GO:0009753
GO:GO:0043565	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M4ELB4	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF743	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI0002548190	SEG:seg	:	:	:	:

Description

AT3G06490 (E=4e-146) MYB108, AtMYB108, BOS1 | MYB108 (myb domain protein 108); DNA binding / transcription factor

Coordinates

chrA05:-:23166170..23168253

Molecular Weight (calculated)

37130.8 Da

IEP (calculated)

4.614

GRAVY (calculated)

-0.864

Length

322 amino acids

Sequence
(BLAST)

001: MDEKGRTLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATHG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASAAATV ATTTKTTTTT GSAATSSSNT TSNNQFMTYD YNNNSMGQQF
201: GVVNNDYITP DNSNVAVSPM SDLTEYYSAQ NTYPEYYSGQ VGNNYYPDQD LVVPQILPDN YLDYSGLLDE DLAVMQEQSN LNWFEDINGA TSSSDSLWNI
301: GESDEDLWFL QDQQQFNNNG NF

Best Arabidopsis Sequence Match ( AT3G06490.1 )
(BLAST)

001: MDEKGRSLKN NNMEDEMDLK RGPWTAEEDF KLMNYIATNG EGRWNSLSRC AGLQRTGKSC RLRWLNYLRP DVRRGNITLE EQLLILELHS RWGNRWSKIA
101: QYLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSQQFKDTMK YLWMPRLVER IQSASASSAA AATTTTTTTT GSAGTSSCIT TSNNQFMNYD YNNNNMGQQF
201: GVMSNNDYIT PENSSVAVSP ASDLTEYYSA PNPNPEYYSG QMGNSYYPDQ NLVSSQLLPD NYFDYSGLLD EDLTAMQEQS NLSWFENING AASSSDSLWN
301: IGETDEEFWF LQQQQQFNNN GSF

Arabidopsis Description

MYB108Transcription factor MYB108 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDE1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.