Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011745 | Potato | nucleus | 93.91 | 92.31 |
| Solyc12g099130.1.1 | Tomato | nucleus | 87.39 | 85.53 |
| GSMUA_Achr4P19990_001 | Banana | nucleus | 39.13 | 70.31 |
| CDX85422 | Canola | nucleus | 51.74 | 65.03 |
| GSMUA_Achr5P21090_001 | Banana | nucleus | 50.87 | 64.29 |
| CDX86220 | Canola | nucleus | 51.74 | 61.66 |
| GSMUA_Achr3P12730_001 | Banana | nucleus | 40.0 | 52.57 |
| PGSC0003DMT400022600 | Potato | nucleus | 65.22 | 50.51 |
| GSMUA_Achr11P... | Banana | nucleus | 56.09 | 49.24 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 64.78 | 48.69 |
| GSMUA_Achr8P10800_001 | Banana | nucleus | 53.91 | 48.44 |
| AT1G48000.1 | Thale cress | nucleus | 50.87 | 48.15 |
| PGSC0003DMT400011748 | Potato | nucleus | 61.3 | 47.8 |
| PGSC0003DMT400072687 | Potato | nucleus | 28.26 | 47.79 |
| GSMUA_Achr11P... | Banana | nucleus | 54.78 | 47.73 |
| GSMUA_Achr9P16640_001 | Banana | nucleus | 53.91 | 47.69 |
| Bra001202.1-P | Field mustard | nucleus | 62.17 | 47.04 |
| CDY33891 | Canola | nucleus | 64.78 | 46.86 |
| CDY05611 | Canola | nucleus | 64.78 | 46.86 |
| Bra020624.1-P | Field mustard | nucleus | 64.78 | 46.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.04 | 45.69 |
| CDY24688 | Canola | nucleus | 63.04 | 45.45 |
| PGSC0003DMT400001278 | Potato | nucleus | 40.87 | 45.41 |
| GSMUA_Achr1P24960_001 | Banana | nucleus | 53.04 | 45.19 |
| CDY05270 | Canola | nucleus | 63.04 | 45.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.78 | 44.84 |
| KRH02414 | Soybean | nucleus | 62.61 | 44.72 |
| CDY34949 | Canola | nucleus | 62.17 | 44.69 |
| CDX99864 | Canola | nucleus | 62.17 | 44.69 |
| Bra040274.1-P | Field mustard | nucleus | 62.17 | 44.69 |
| GSMUA_Achr8P29910_001 | Banana | nucleus | 52.17 | 44.61 |
| Bra029582.1-P | Field mustard | nucleus | 62.17 | 44.41 |
| Bra010021.1-P | Field mustard | nucleus | 62.17 | 44.27 |
| Bra010022.1-P | Field mustard | nucleus | 62.17 | 44.27 |
| KRH50671 | Soybean | nucleus | 61.74 | 43.69 |
| PGSC0003DMT400069841 | Potato | nucleus | 59.57 | 42.28 |
| KRH36928 | Soybean | nucleus | 61.74 | 41.76 |
| TraesCS4A01G172200.1 | Wheat | nucleus | 51.74 | 41.18 |
| CDY70282 | Canola | nucleus | 52.61 | 41.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.13 | 41.09 |
| KRG97314 | Soybean | nucleus | 60.87 | 41.06 |
| TraesCSU01G069000.1 | Wheat | nucleus | 51.74 | 41.03 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 49.57 | 41.01 |
| HORVU4Hr1G028780.1 | Barley | nucleus | 52.17 | 40.96 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 52.17 | 40.96 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 48.7 | 40.29 |
| TraesCS5A01G087100.1 | Wheat | nucleus | 48.7 | 40.29 |
| HORVU5Hr1G022690.1 | Barley | nucleus | 49.13 | 40.07 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 53.91 | 38.99 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 49.57 | 38.91 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 53.91 | 38.87 |
| TraesCS4A01G124900.1 | Wheat | nucleus | 53.91 | 38.87 |
| GSMUA_Achr7P05570_001 | Banana | nucleus | 45.65 | 38.6 |
| EES00624 | Sorghum | nucleus | 51.3 | 38.56 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 46.09 | 38.13 |
| PGSC0003DMT400037716 | Potato | nucleus | 44.78 | 37.73 |
| Zm00001d040594_P001 | Maize | nucleus | 49.57 | 37.62 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 50.0 | 37.46 |
| TraesCS3A01G418100.1 | Wheat | nucleus | 49.57 | 37.01 |
| PGSC0003DMT400014383 | Potato | nucleus | 43.91 | 36.33 |
| GSMUA_Achr11P... | Banana | nucleus | 53.91 | 36.05 |
| Zm00001d028930_P001 | Maize | nucleus | 52.61 | 36.01 |
| KXG39500 | Sorghum | nucleus | 52.61 | 36.01 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 50.43 | 35.91 |
| GSMUA_Achr3P08370_001 | Banana | nucleus | 44.78 | 35.89 |
| TraesCS1A01G076200.1 | Wheat | nucleus | 50.43 | 35.8 |
| HORVU1Hr1G016420.1 | Barley | nucleus | 50.43 | 35.69 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 50.43 | 35.58 |
| Zm00001d009066_P001 | Maize | nucleus | 48.7 | 35.22 |
| CDX74100 | Canola | nucleus | 50.87 | 34.72 |
| TraesCS2A01G097200.1 | Wheat | nucleus | 49.13 | 34.66 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 49.13 | 34.45 |
| Zm00001d047579_P001 | Maize | nucleus | 51.74 | 34.1 |
| PGSC0003DMT400069955 | Potato | nucleus | 33.91 | 34.06 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 49.13 | 34.04 |
| KXG36991 | Sorghum | nucleus | 50.0 | 33.63 |
| EES17207 | Sorghum | nucleus | 49.13 | 33.53 |
| HORVU4Hr1G052490.5 | Barley | nucleus, plastid | 53.48 | 33.33 |
| Zm00001d048647_P001 | Maize | nucleus | 50.87 | 33.24 |
| HORVU3Hr1G092820.1 | Barley | nucleus | 47.39 | 32.93 |
| Zm00001d007191_P001 | Maize | nucleus | 49.57 | 32.85 |
| Zm00001d030644_P001 | Maize | nucleus | 49.57 | 32.48 |
| PGSC0003DMT400040149 | Potato | nucleus | 30.43 | 32.11 |
| Zm00001d024726_P001 | Maize | nucleus | 48.7 | 31.55 |
| PGSC0003DMT400003479 | Potato | nucleus | 32.61 | 31.51 |
| EES10257 | Sorghum | nucleus | 49.57 | 31.23 |
| Zm00001d010933_P001 | Maize | nucleus | 49.57 | 31.06 |
| PGSC0003DMT400003796 | Potato | nucleus | 33.48 | 30.43 |
| HORVU2Hr1G016380.1 | Barley | nucleus | 47.83 | 30.3 |
| Os05t0132700-01 | Rice | nucleus | 27.83 | 29.77 |
| KXG21220 | Sorghum | nucleus | 49.57 | 28.08 |
| Zm00001d024725_P001 | Maize | nucleus | 49.57 | 28.08 |
| KXG21221 | Sorghum | nucleus | 49.13 | 23.69 |
| CDY58600 | Canola | nucleus | 26.96 | 19.2 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011750 | EnsemblPlantsGene:PGSC0003DMG400004612 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF494 | PFAM:PF00249 | PFscan:PS51294 | PGSC:PGSC0003DMG400004612 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000295820C | UniProt:M1A033 | MapMan:15.5.2.1 | : | : |
Description
ABA-induced MYB transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400004612]
Coordinates
chr12:+:59916609..59917573
Molecular Weight (calculated)
27297.8 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.897
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MELRRGSWTV EEDYILMNYI SHHGEGRWNS LSRCAGLKRT GKSCRLRWLN YLRPNVRHGN ITLEEQLLIL QLHFRWGNRW SKIAEHLPGR TDNEIKNYWR
101: TRVQKHAKQL KCDVNSKQFQ DTLRYLWIPR LVERIQASKI SNNDSSSDTQ QPVQLTNNNN NSILITSVTP ENSSVATSSE NSNQDYYQVN QSDQLWFEDY
201: QAMDQQNNIE LWMDNEDVFD NLCNIEDIWS
101: TRVQKHAKQL KCDVNSKQFQ DTLRYLWIPR LVERIQASKI SNNDSSSDTQ QPVQLTNNNN NSILITSVTP ENSSVATSSE NSNQDYYQVN QSDQLWFEDY
201: QAMDQQNNIE LWMDNEDVFD NLCNIEDIWS
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.