Factsheet for Zm00001d009066_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040594_P001	Maize	nucleus	74.53	78.22
EES00624	Sorghum	nucleus	73.9	76.8
Os01t0298400-01	Rice	extracellular, nucleus	53.46	58.02
TraesCS3D01G413700.1	Wheat	nucleus	53.46	58.02
CDX85422	Canola	nucleus	33.02	57.38
TraesCS3B01G453300.1	Wheat	nucleus	53.46	55.37
TraesCS3A01G418100.1	Wheat	nucleus	53.14	54.87
CDX86220	Canola	nucleus	33.02	54.4
HORVU3Hr1G092820.1	Barley	nucleus	53.77	51.66
PGSC0003DMT400011745	Potato	nucleus	35.85	48.72
PGSC0003DMT400011750	Potato	nucleus	35.22	48.7
Solyc12g099130.1.1	Tomato	nucleus	34.91	47.23
Solyc12g099120.1.1	Tomato	nucleus	36.16	46.56
AT1G48000.1	Thale cress	nucleus	33.65	44.03
Solyc01g057910.2.1	Tomato	nucleus	38.36	42.51
VIT_05s0077g00500.t01	Wine grape	nucleus	40.57	42.16
PGSC0003DMT400022600	Potato	nucleus	38.99	41.75
Bra001202.1-P	Field mustard	nucleus	37.11	38.82
PGSC0003DMT400011748	Potato	nucleus	35.85	38.64
CDY33891	Canola	nucleus	38.36	38.36
CDY05611	Canola	nucleus	38.36	38.36
Bra020624.1-P	Field mustard	nucleus	38.36	38.36
AT5G49620.2	Thale cress	nucleus	38.68	38.32
KRH50671	Soybean	nucleus	38.99	38.15
Zm00001d028930_P001	Maize	nucleus	40.25	38.1
Solyc05g053330.2.1	Tomato	nucleus	38.05	38.05
CDY24688	Canola	nucleus	37.74	37.62
KRH02414	Soybean	nucleus	38.05	37.58
AT3G06490.1	Thale cress	nucleus	38.05	37.46
Bra029582.1-P	Field mustard	nucleus	37.74	37.27
CDY34949	Canola	nucleus	37.42	37.19
CDX99864	Canola	nucleus	37.42	37.19
Bra040274.1-P	Field mustard	nucleus	37.42	37.19
PGSC0003DMT400069841	Potato	nucleus	37.74	37.04
Solyc12g099140.1.1	Tomato	nucleus	34.91	37.0
CDY05270	Canola	nucleus	37.42	36.96
Zm00001d048647_P001	Maize	nucleus	40.57	36.65
Zm00001d007191_P001	Maize	nucleus	39.94	36.6
KRH36928	Soybean	nucleus	38.99	36.47
KRG97314	Soybean	nucleus	38.99	36.36
Bra010022.1-P	Field mustard	nucleus	36.48	35.91
Bra010021.1-P	Field mustard	nucleus	36.48	35.91
Zm00001d047579_P001	Maize	nucleus	39.31	35.82
Zm00001d010933_P001	Maize	nucleus	39.94	34.6
GSMUA_Achr11P...	Banana	nucleus	36.79	34.01
Zm00001d030644_P001	Maize	nucleus	37.42	33.9
CDY70282	Canola	nucleus	31.13	33.67
Zm00001d024726_P001	Maize	nucleus	37.11	33.24
Zm00001d048383_P001	Maize	nucleus	23.27	31.9
Zm00001d008528_P001	Maize	nucleus	35.85	31.49
Zm00001d040019_P001	Maize	nucleus	35.85	31.49
Zm00001d044107_P001	Maize	nucleus	25.79	31.06
Zm00001d030678_P001	Maize	nucleus	23.58	30.99
Zm00001d027623_P001	Maize	nucleus	24.21	30.92
Zm00001d024725_P001	Maize	nucleus	39.31	30.79
Zm00001d048623_P002	Maize	nucleus	22.01	30.7
Zm00001d041576_P001	Maize	nucleus	23.58	30.0
Zm00001d017243_P001	Maize	nucleus	24.84	28.11
CDX74100	Canola	nucleus	29.56	27.89
Zm00001d025823_P001	Maize	nucleus	23.9	27.34
Zm00001d035605_P001	Maize	nucleus	26.73	25.99
Zm00001d051117_P001	Maize	nucleus	20.44	23.3
Zm00001d035604_P001	Maize	nucleus	25.79	22.28
CDY58600	Canola	nucleus	21.38	21.05

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:103635051	MapMan:15.5.2.1	ProteinID:AIB05157.1	ProteinID:AQK91292.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7VBX6
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF659	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0001D840B5	EnsemblPlantsGene:Zm00001d009066	EnsemblPlants:Zm00001d009066_P001	EnsemblPlants:Zm00001d009066_T001
SEG:seg	:	:	:	:	:

Description

MYB-transcription factor 90Putative MYB DNA-binding domain superfamily protein

Coordinates

chr8:+:34057004..34057960

Molecular Weight (calculated)

34676.5 Da

IEP (calculated)

5.093

GRAVY (calculated)

-0.567

Length

318 amino acids

Sequence
(BLAST)

001: MAVLWKGSSS SPCDWPEATV TTVSDADDDA AAAAELRRGP WTVEEDAVLA GHVAAHGEGR WNELACAAGL RRTGKSCRLR WLNYLRPGVR RGGFTPREQL
101: LVLDLHSRWG NRWSRIAAHL PGRTDNEVKN YWRTRVQKHA RQLGCAVGSR QFNDAVRNLW VPRLLERIHA DDSAAAAAAD ADADASRCCY SASPSHDELS
201: SSHPAHRNAA PITGDDCARA PSPDVSSVVT GSSWSREASP TSQLFKSSSS TVEGCSTSTE TEQCQNGCSS SATSVDMFDE SWSELLARAI HDDDAEFGSG
301: ETGDSWWSLE DIWEQPLY

Best Arabidopsis Sequence Match ( AT1G25340.1 )
(BLAST)

001: MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK
101: YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD
201: FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN

Arabidopsis Description

MYB116myb domain protein 116 [Source:TAIR;Acc:AT1G25340]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.