Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17592 | Sorghum | nucleus | 81.04 | 79.34 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 46.48 | 59.84 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 47.71 | 59.32 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 48.32 | 58.96 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 44.95 | 56.98 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 32.11 | 50.24 |
| GSMUA_Achr10P... | Banana | nucleus | 34.25 | 47.46 |
| PGSC0003DMT400040149 | Potato | nucleus | 31.19 | 46.79 |
| Solyc11g073120.1.1 | Tomato | nucleus | 30.89 | 46.54 |
| Zm00001d035604_P001 | Maize | nucleus | 51.99 | 46.2 |
| GSMUA_Achr11P... | Banana | nucleus | 33.64 | 45.64 |
| AT5G59780.3 | Thale cress | nucleus | 32.42 | 45.11 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 32.42 | 44.73 |
| Zm00001d030678_P001 | Maize | nucleus | 32.72 | 44.21 |
| Solyc06g005330.2.1 | Tomato | nucleus | 31.8 | 44.07 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 32.42 | 43.98 |
| Bra002533.1-P | Field mustard | nucleus | 31.8 | 43.88 |
| CDY49581 | Canola | nucleus | 31.8 | 43.88 |
| CDX80230 | Canola | nucleus | 31.5 | 43.46 |
| Bra006694.1-P | Field mustard | nucleus | 32.11 | 43.39 |
| CDX88722 | Canola | nucleus | 32.11 | 43.39 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 33.95 | 43.36 |
| CDY70097 | Canola | nucleus | 31.19 | 43.22 |
| Bra020289.1-P | Field mustard | nucleus | 31.19 | 43.22 |
| CDX71075 | Canola | nucleus | 31.8 | 43.15 |
| Zm00001d048623_P002 | Maize | nucleus | 29.97 | 42.98 |
| Zm00001d041576_P001 | Maize | nucleus | 32.42 | 42.4 |
| KRH10298 | Soybean | nucleus | 32.72 | 41.96 |
| Bra018223.1-P | Field mustard | nucleus | 32.11 | 41.67 |
| AT3G46130.1 | Thale cress | nucleus | 32.72 | 41.47 |
| KRH23019 | Soybean | nucleus | 33.33 | 41.29 |
| KRH29850 | Soybean | nucleus | 30.89 | 37.97 |
| KRH24842 | Soybean | nucleus | 30.89 | 37.97 |
| CDX86040 | Canola | nucleus | 32.11 | 37.77 |
| CDX86041 | Canola | nucleus | 32.11 | 37.77 |
| CDX99125 | Canola | nucleus | 32.11 | 37.77 |
| Zm00001d048383_P001 | Maize | nucleus | 24.46 | 34.48 |
| Zm00001d027623_P001 | Maize | nucleus | 24.46 | 32.13 |
| Zm00001d044107_P001 | Maize | nucleus | 24.77 | 30.68 |
| Zm00001d017243_P001 | Maize | nucleus | 25.38 | 29.54 |
| Zm00001d025823_P001 | Maize | nucleus | 24.46 | 28.78 |
| Zm00001d009066_P001 | Maize | nucleus | 25.99 | 26.73 |
| Zm00001d007191_P001 | Maize | nucleus | 28.13 | 26.51 |
| Zm00001d040594_P001 | Maize | nucleus | 24.46 | 26.4 |
| Zm00001d051117_P001 | Maize | nucleus | 21.71 | 25.45 |
| Zm00001d024726_P001 | Maize | nucleus | 26.61 | 24.51 |
| Zm00001d028930_P001 | Maize | nucleus | 25.08 | 24.4 |
| Zm00001d047579_P001 | Maize | nucleus | 25.99 | 24.36 |
| Zm00001d010933_P001 | Maize | nucleus | 26.91 | 23.98 |
| Zm00001d048647_P001 | Maize | nucleus | 24.77 | 23.01 |
| Zm00001d030644_P001 | Maize | nucleus | 23.55 | 21.94 |
| Zm00001d040019_P001 | Maize | nucleus | 24.16 | 21.82 |
| Zm00001d008528_P001 | Maize | nucleus | 24.16 | 21.82 |
| Zm00001d024725_P001 | Maize | nucleus | 26.91 | 21.67 |
Protein Annotations
| EnsemblPlants:Zm00001d035605_P001 | EnsemblPlants:Zm00001d035605_T001 | EnsemblPlantsGene:Zm00001d035605 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF591 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK79344.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000220C19C | UniProt:A0A1D6LHJ5 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 21Putative MYB DNA-binding domain superfamily protein
Coordinates
chr6:-:36427345..36428954
Molecular Weight (calculated)
36068.0 Da
IEP (calculated)
7.004
GRAVY (calculated)
-0.946
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDRYPHHQS SMATPAAASK MSKKLQGGGD RSSGSSSRGS GNSDKQQVPA AAMRKGPWTE EEDAQLVWFV RLFGERRWDF LAKVSGLRRT GKSCRLRWVN
101: YLHPGLRRGR ITADEERLIL QLHAQWGSRW SRIARSLPGR TDNEIKNFWR TRARKQKAAA QQQQQQQDSR SSKTATASAF SGSASSVTTT TSSCSGSPSP
201: TSRGCGTATS SSALTESALR QSGGEDEDAE LDEASTTTTT TASQRQHQDD DHQQQHQECY ASDHFWNDIA AAEAAIYMLI DGGWTGSGPG HPAADPPSSP
301: AWEYCSDYSL WRIDDDEYYE KMLDSSS
101: YLHPGLRRGR ITADEERLIL QLHAQWGSRW SRIARSLPGR TDNEIKNFWR TRARKQKAAA QQQQQQQDSR SSKTATASAF SGSASSVTTT TSSCSGSPSP
201: TSRGCGTATS SSALTESALR QSGGEDEDAE LDEASTTTTT TASQRQHQDD DHQQQHQECY ASDHFWNDIA AAEAAIYMLI DGGWTGSGPG HPAADPPSSP
301: AWEYCSDYSL WRIDDDEYYE KMLDSSS
001: MKMMQEEGNR KGPWTEQEDI LLVNFVHLFG DRRWDFIAKV SGLNRTGKSC RLRWVNYLHP GLKRGKMTPQ EERLVLELHA KWGNRWSKIA RKLPGRTDNE
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG
Arabidopsis Description
ATMYB48myb domain protein 48 [Source:TAIR;Acc:AT3G46130]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.