Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024726_P001 | Maize | nucleus | 75.62 | 86.48 |
| Zm00001d010933_P001 | Maize | nucleus | 66.26 | 73.3 |
| CDX85422 | Canola | nucleus | 29.8 | 66.12 |
| CDX86220 | Canola | nucleus | 29.8 | 62.69 |
| KXG21221 | Sorghum | nucleus | 63.55 | 54.09 |
| PGSC0003DMT400011745 | Potato | nucleus | 28.82 | 50.0 |
| PGSC0003DMT400011750 | Potato | nucleus | 28.08 | 49.57 |
| Solyc12g099130.1.1 | Tomato | nucleus | 28.57 | 49.36 |
| Solyc12g099120.1.1 | Tomato | nucleus | 29.31 | 48.18 |
| AT1G48000.1 | Thale cress | nucleus | 28.57 | 47.74 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 33.74 | 44.77 |
| Solyc01g057910.2.1 | Tomato | nucleus | 31.53 | 44.6 |
| PGSC0003DMT400022600 | Potato | nucleus | 31.53 | 43.1 |
| PGSC0003DMT400011748 | Potato | nucleus | 31.28 | 43.05 |
| KRH36928 | Soybean | nucleus | 35.47 | 42.35 |
| KRG97314 | Soybean | nucleus | 35.47 | 42.23 |
| KRH50671 | Soybean | nucleus | 33.74 | 42.15 |
| Zm00001d028930_P001 | Maize | nucleus | 34.73 | 41.96 |
| KRH02414 | Soybean | nucleus | 33.0 | 41.61 |
| Solyc05g053330.2.1 | Tomato | nucleus | 32.51 | 41.51 |
| Solyc12g099140.1.1 | Tomato | nucleus | 30.54 | 41.33 |
| Zm00001d040594_P001 | Maize | nucleus | 30.79 | 41.25 |
| Bra001202.1-P | Field mustard | nucleus | 30.79 | 41.12 |
| CDY33891 | Canola | nucleus | 32.02 | 40.88 |
| CDY05611 | Canola | nucleus | 32.02 | 40.88 |
| Bra020624.1-P | Field mustard | nucleus | 32.02 | 40.88 |
| Zm00001d047579_P001 | Maize | nucleus | 34.98 | 40.69 |
| Bra010022.1-P | Field mustard | nucleus | 31.77 | 39.94 |
| Bra010021.1-P | Field mustard | nucleus | 31.77 | 39.94 |
| Zm00001d009066_P001 | Maize | nucleus | 30.79 | 39.31 |
| CDY24688 | Canola | nucleus | 30.79 | 39.19 |
| Bra029582.1-P | Field mustard | nucleus | 31.03 | 39.13 |
| Bra040274.1-P | Field mustard | nucleus | 30.79 | 39.06 |
| CDY34949 | Canola | nucleus | 30.79 | 39.06 |
| CDX99864 | Canola | nucleus | 30.79 | 39.06 |
| Zm00001d007191_P001 | Maize | nucleus | 33.25 | 38.9 |
| PGSC0003DMT400069841 | Potato | nucleus | 31.03 | 38.89 |
| CDY05270 | Canola | nucleus | 30.54 | 38.51 |
| AT5G49620.2 | Thale cress | nucleus | 30.3 | 38.32 |
| AT3G06490.1 | Thale cress | nucleus | 30.3 | 38.08 |
| Zm00001d048647_P001 | Maize | nucleus | 32.27 | 37.22 |
| Zm00001d008528_P001 | Maize | nucleus | 32.02 | 35.91 |
| Zm00001d044107_P001 | Maize | nucleus | 22.91 | 35.23 |
| Zm00001d030644_P001 | Maize | nucleus | 29.56 | 34.19 |
| Zm00001d040019_P001 | Maize | nucleus | 30.3 | 33.98 |
| Zm00001d048383_P001 | Maize | nucleus | 19.21 | 33.62 |
| CDY70282 | Canola | nucleus | 24.14 | 33.33 |
| Zm00001d017243_P001 | Maize | nucleus | 22.17 | 32.03 |
| Zm00001d030678_P001 | Maize | nucleus | 18.72 | 31.41 |
| Zm00001d027623_P001 | Maize | nucleus | 19.21 | 31.33 |
| Zm00001d041576_P001 | Maize | nucleus | 19.21 | 31.2 |
| Zm00001d048623_P002 | Maize | nucleus | 17.24 | 30.7 |
| Zm00001d025823_P001 | Maize | nucleus | 19.95 | 29.14 |
| CDX74100 | Canola | nucleus | 23.4 | 28.19 |
| Zm00001d035605_P001 | Maize | nucleus | 21.67 | 26.91 |
| Zm00001d051117_P001 | Maize | nucleus | 18.47 | 26.88 |
| Zm00001d035604_P001 | Maize | nucleus | 20.44 | 22.55 |
| CDY58600 | Canola | nucleus | 17.49 | 21.98 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103641342 | MapMan:15.5.2.1 | ProteinID:AIB05202.1 | ProteinID:AQK41929.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7TRC0 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF921 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002210CB9 | EnsemblPlantsGene:Zm00001d024725 | EnsemblPlants:Zm00001d024725_P001 | EnsemblPlants:Zm00001d024725_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 101Putative MYB DNA-binding domain superfamily protein
Coordinates
chr10:-:85285499..85286719
Molecular Weight (calculated)
43569.2 Da
IEP (calculated)
5.804
GRAVY (calculated)
-0.453
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDMDMAMA MVGFDEDMDQ VLAAMSPAGS SATSSAPTAA AAPPAVVAAG SSDDDEAGAA DLRRGPWTAE EDILLVNYIA AHGEGRWNSL ALSAGLKRTG
101: KSCRLRWLNY LRPNVRRGNI TAEEQLLILD LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKQLR CDVNSAHFRH IVRHVWMPRL LERAQADARC
201: GGVQAPATTT ASAPPACYNY YDDGRQHLLQ QQGSAHHGVP AASEAHHHHQ YYSEPAGPTA ATATALSPDD ASSALRPSSS LTADDASHYA AAYAYTSAAT
301: ATPTTDDQQG VLHHCGADAR TGPTPSDAAG DDDVFAGTTW SELLATTATG GPHEDCSSMS MIGLQLQDFG IGYFEGGLWS LDDLSLEQPC TLSSPADAYH
401: HHHACS
101: KSCRLRWLNY LRPNVRRGNI TAEEQLLILD LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKQLR CDVNSAHFRH IVRHVWMPRL LERAQADARC
201: GGVQAPATTT ASAPPACYNY YDDGRQHLLQ QQGSAHHGVP AASEAHHHHQ YYSEPAGPTA ATATALSPDD ASSALRPSSS LTADDASHYA AAYAYTSAAT
301: ATPTTDDQQG VLHHCGADAR TGPTPSDAAG DDDVFAGTTW SELLATTATG GPHEDCSSMS MIGLQLQDFG IGYFEGGLWS LDDLSLEQPC TLSSPADAYH
401: HHHACS
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.