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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g053330.2.1 Tomato nucleus 92.59 94.34
GSMUA_Achr4P19990_001 Banana nucleus 30.86 78.12
CDX85422 Canola nucleus 40.74 72.13
GSMUA_Achr5P21090_001 Banana nucleus 39.2 69.78
CDX86220 Canola nucleus 40.12 67.36
PGSC0003DMT400011745 Potato nucleus 43.83 60.68
PGSC0003DMT400011750 Potato nucleus 42.28 59.57
GSMUA_Achr3P12730_001 Banana nucleus 31.79 58.86
PGSC0003DMT400022600 Potato nucleus 53.4 58.25
GSMUA_Achr11P... Banana nucleus 44.44 54.96
PGSC0003DMT400001278 Potato nucleus 34.26 53.62
VIT_05s0077g00500.t01 Wine grape nucleus 50.62 53.59
GSMUA_Achr9P16640_001 Banana nucleus 42.59 53.08
GSMUA_Achr8P10800_001 Banana nucleus 41.36 52.34
GSMUA_AchrUn_... Banana nucleus 42.9 52.06
GSMUA_Achr11P... Banana nucleus 42.28 51.89
PGSC0003DMT400011748 Potato nucleus 47.22 51.86
Bra001202.1-P Field mustard nucleus 48.46 51.64
GSMUA_AchrUn_... Banana nucleus 44.44 51.25
GSMUA_Achr1P24960_001 Banana nucleus 42.59 51.11
CDY34949 Canola nucleus 49.38 50.0
CDX99864 Canola nucleus 49.38 50.0
Bra040274.1-P Field mustard nucleus 49.38 50.0
KRH02414 Soybean nucleus 48.46 48.76
CDY33891 Canola nucleus 47.84 48.74
CDY05611 Canola nucleus 47.84 48.74
Bra020624.1-P Field mustard nucleus 47.84 48.74
CDY24688 Canola nucleus 47.84 48.59
TraesCS5A01G087100.1 Wheat nucleus 41.67 48.56
TraesCS5B01G093000.1 Wheat nucleus 41.67 48.56
PGSC0003DMT400072687 Potato nucleus 20.37 48.53
CDY05270 Canola nucleus 47.84 48.14
KRH50671 Soybean nucleus 48.15 48.0
GSMUA_Achr8P29910_001 Banana nucleus 39.81 47.96
HORVU5Hr1G022690.1 Barley nucleus 41.67 47.87
TraesCS5D01G099100.1 Wheat nucleus 41.05 47.84
Bra029582.1-P Field mustard nucleus 47.53 47.83
TraesCS4A01G172200.1 Wheat nucleus 42.28 47.4
TraesCSU01G069000.1 Wheat nucleus 41.98 46.9
HORVU4Hr1G028780.1 Barley nucleus 42.28 46.76
TraesCS4D01G142900.1 Wheat nucleus 42.28 46.76
KRG97314 Soybean nucleus 48.77 46.33
GSMUA_AchrUn_... Banana nucleus 39.2 46.18
KRH36928 Soybean nucleus 48.15 45.88
Bra010021.1-P Field mustard nucleus 45.37 45.51
Bra010022.1-P Field mustard nucleus 45.37 45.51
CDY70282 Canola nucleus 41.05 45.24
TraesCS4D01G181100.1 Wheat nucleus 43.83 44.51
GSMUA_Achr7P05570_001 Banana nucleus 37.35 44.49
TraesCS4A01G124900.1 Wheat nucleus 43.52 44.2
TraesCS4B01G179500.1 Wheat nucleus 43.21 44.03
KXG39500 Sorghum nucleus 45.37 43.75
TraesCS3D01G413700.1 Wheat nucleus 38.89 43.0
Zm00001d028930_P001 Maize nucleus 43.83 42.26
PGSC0003DMT400037716 Potato nucleus 35.19 41.76
GSMUA_Achr11P... Banana nucleus 43.83 41.28
EES00624 Sorghum nucleus 38.89 41.18
PGSC0003DMT400014383 Potato nucleus 34.88 40.65
TraesCS3A01G418100.1 Wheat nucleus 38.58 40.58
Zm00001d040594_P001 Maize nucleus 37.65 40.26
Zm00001d047579_P001 Maize nucleus 43.21 40.11
TraesCS3D01G014800.1 Wheat nucleus 34.26 39.93
TraesCS3B01G453300.1 Wheat nucleus 37.65 39.74
TraesCS1A01G076200.1 Wheat nucleus 39.51 39.51
TraesCS1D01G078600.1 Wheat nucleus 39.2 39.32
TraesCS1B01G094500.1 Wheat nucleus 39.2 38.96
HORVU1Hr1G016420.1 Barley nucleus 38.89 38.77
KXG36991 Sorghum nucleus 40.12 38.01
PGSC0003DMT400069955 Potato nucleus 26.85 37.99
EES17207 Sorghum nucleus 39.51 37.98
HORVU4Hr1G052490.5 Barley nucleus, plastid 43.21 37.94
Zm00001d030644_P001 Maize nucleus 41.05 37.89
Zm00001d009066_P001 Maize nucleus 37.04 37.74
TraesCS2B01G112600.1 Wheat nucleus 38.58 37.65
GSMUA_Achr3P08370_001 Banana nucleus 33.33 37.63
TraesCS2D01G096000.1 Wheat nucleus 37.96 37.5
TraesCS2A01G097200.1 Wheat nucleus 37.65 37.42
CDX74100 Canola nucleus 38.89 37.39
Zm00001d048647_P001 Maize nucleus 40.43 37.22
Zm00001d007191_P001 Maize nucleus 39.81 37.18
HORVU3Hr1G092820.1 Barley nucleus 37.65 36.86
EES10257 Sorghum nucleus 41.36 36.71
PGSC0003DMT400040149 Potato nucleus 24.38 36.24
Zm00001d010933_P001 Maize nucleus 40.12 35.42
Zm00001d024726_P001 Maize nucleus 38.27 34.93
PGSC0003DMT400003479 Potato nucleus 25.0 34.03
PGSC0003DMT400003796 Potato nucleus 25.93 33.2
KXG21220 Sorghum nucleus 40.12 32.02
HORVU2Hr1G016380.1 Barley nucleus 35.49 31.68
Os05t0132700-01 Rice nucleus 20.68 31.16
Zm00001d024725_P001 Maize nucleus 38.89 31.03
KXG21221 Sorghum nucleus 39.51 26.83
CDY58600 Canola nucleus 20.06 20.12
Protein Annotations
Gene3D:1.10.10.60EntrezGene:102606117MapMan:15.5.2.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930UniProt:M1CL87InterPro:Myb_domPFAM:PF00249
EnsemblPlantsGene:PGSC0003DMG400027157PGSC:PGSC0003DMG400027157EnsemblPlants:PGSC0003DMT400069841PFscan:PS51294PANTHER:PTHR10641PANTHER:PTHR10641:SF743
InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689UniParc:UPI000296F643RefSeq:XP_006355725.1SEG:seg
Description
R2R3 transcription factor MYB108 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400027157]
Coordinates
chr5:+:48603078..48605136
Molecular Weight (calculated)
37490.5 Da
IEP (calculated)
6.581
GRAVY (calculated)
-0.942
Length
324 amino acids
Sequence
(BLAST)
001: MEYHGQKIEV DSGRGREGGR GDCNENNQEI KEEDVVMELR RGPWTVEEDF TLINFIAHHG EGRWNSLSRC AGLKRTGKSC RLRWLNYLRP DVRRGNITLE
101: EQLLILELHS RWGNRWSKIA QHLPGRTDNE IKNYWRTRVQ KHAKQLKCDV NSKQFKDTMK YLWMPRLAER IQATAAATSN PTAASSSGPT ATTTYIQNQE
201: IQHPLPNMNH HVPEYLPIQL MNIEKTNSLN YSATSASSDN YSSDLTDGCY NFPINQSNNQ DHSQVNQSTN QFCYGESTIN PTSYNFHPGF QGFQEVDQQN
301: NTQWMENPWN IEDVCFLQQL NNDM
Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)
001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF
Arabidopsis Description
AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.