Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024726_P001 | Maize | nucleus | 66.76 | 69.01 |
| Zm00001d024725_P001 | Maize | nucleus | 73.3 | 66.26 |
| CDX85422 | Canola | nucleus | 32.97 | 66.12 |
| CDX86220 | Canola | nucleus | 32.97 | 62.69 |
| PGSC0003DMT400011745 | Potato | nucleus | 31.88 | 50.0 |
| PGSC0003DMT400011750 | Potato | nucleus | 31.06 | 49.57 |
| Solyc12g099130.1.1 | Tomato | nucleus | 31.34 | 48.94 |
| Solyc12g099120.1.1 | Tomato | nucleus | 32.43 | 48.18 |
| AT1G48000.1 | Thale cress | nucleus | 31.61 | 47.74 |
| VIT_05s0077g00500.t01 | Wine grape | nucleus | 37.06 | 44.44 |
| Solyc01g057910.2.1 | Tomato | nucleus | 34.6 | 44.25 |
| KRH36928 | Soybean | nucleus | 39.78 | 42.94 |
| PGSC0003DMT400022600 | Potato | nucleus | 34.6 | 42.76 |
| Zm00001d028930_P001 | Maize | nucleus | 38.96 | 42.56 |
| KRG97314 | Soybean | nucleus | 39.51 | 42.52 |
| Zm00001d040594_P001 | Maize | nucleus | 34.6 | 41.91 |
| Solyc05g053330.2.1 | Tomato | nucleus | 36.24 | 41.82 |
| Bra001202.1-P | Field mustard | nucleus | 34.6 | 41.78 |
| Zm00001d047579_P001 | Maize | nucleus | 39.51 | 41.55 |
| KRH50671 | Soybean | nucleus | 36.51 | 41.23 |
| CDY33891 | Canola | nucleus | 35.42 | 40.88 |
| CDY05611 | Canola | nucleus | 35.42 | 40.88 |
| Bra020624.1-P | Field mustard | nucleus | 35.42 | 40.88 |
| KRH02414 | Soybean | nucleus | 35.69 | 40.68 |
| PGSC0003DMT400011748 | Potato | nucleus | 32.7 | 40.68 |
| CDY24688 | Canola | nucleus | 35.15 | 40.44 |
| Bra029582.1-P | Field mustard | nucleus | 35.42 | 40.37 |
| PGSC0003DMT400069841 | Potato | nucleus | 35.42 | 40.12 |
| CDY34949 | Canola | nucleus | 34.88 | 40.0 |
| Bra040274.1-P | Field mustard | nucleus | 34.88 | 40.0 |
| CDX99864 | Canola | nucleus | 34.88 | 40.0 |
| Bra010022.1-P | Field mustard | nucleus | 35.15 | 39.94 |
| Bra010021.1-P | Field mustard | nucleus | 35.15 | 39.94 |
| Zm00001d009066_P001 | Maize | nucleus | 34.6 | 39.94 |
| CDY05270 | Canola | nucleus | 34.88 | 39.75 |
| AT5G49620.2 | Thale cress | nucleus | 34.6 | 39.56 |
| AT3G06490.1 | Thale cress | nucleus | 34.33 | 39.01 |
| Solyc12g099140.1.1 | Tomato | nucleus | 31.61 | 38.67 |
| Zm00001d007191_P001 | Maize | nucleus | 36.51 | 38.62 |
| Zm00001d008528_P001 | Maize | nucleus | 37.87 | 38.4 |
| Zm00001d048647_P001 | Maize | nucleus | 35.97 | 37.5 |
| Zm00001d040019_P001 | Maize | nucleus | 35.42 | 35.91 |
| Zm00001d048383_P001 | Maize | nucleus | 22.34 | 35.34 |
| Zm00001d030644_P001 | Maize | nucleus | 33.79 | 35.33 |
| Zm00001d044107_P001 | Maize | nucleus | 25.34 | 35.23 |
| CDY70282 | Canola | nucleus | 28.07 | 35.03 |
| Zm00001d027623_P001 | Maize | nucleus | 22.62 | 33.33 |
| Zm00001d030678_P001 | Maize | nucleus | 20.98 | 31.82 |
| Zm00001d048623_P002 | Maize | nucleus | 19.62 | 31.58 |
| Zm00001d017243_P001 | Maize | nucleus | 23.98 | 31.32 |
| Zm00001d041576_P001 | Maize | nucleus | 21.25 | 31.2 |
| CDX74100 | Canola | nucleus | 26.43 | 28.78 |
| Zm00001d025823_P001 | Maize | nucleus | 21.8 | 28.78 |
| Zm00001d035605_P001 | Maize | nucleus | 23.98 | 26.91 |
| Zm00001d051117_P001 | Maize | nucleus | 20.44 | 26.88 |
| Zm00001d035604_P001 | Maize | nucleus | 22.34 | 22.28 |
| CDY58600 | Canola | nucleus | 18.8 | 21.36 |
Protein Annotations
| EnsemblPlants:Zm00001d010933_P001 | EnsemblPlants:Zm00001d010933_T001 | EnsemblPlantsGene:Zm00001d010933 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF921 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:AQK95274.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0001D83EAA | UniProt:A0A1D6FUZ6 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 147Putative MYB DNA-binding domain superfamily protein
Coordinates
chr8:+:134043470..134044573
Molecular Weight (calculated)
39755.8 Da
IEP (calculated)
4.603
GRAVY (calculated)
-0.449
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDMGMTMV GLDEDLDQVL AAISSAGSSA TSAPAATGGS SEDDETTAAT ELRRGPWTVD EDILLVNYIA AHGEGRWNSL ARSAGLRRTG KSCRLRWLNY
101: LRPDVRRGNI TVEEQLLILE LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHARRLR CDANSAQFRH LWMPRLLERA QDLQQPAAAT VPAAVAQAAP
201: ATTTTSAPPP ACYYNYYYDD HHHLAHQQGA LHQYYSEPAG QTAAAATALS PDDASSALRP PSSSLTADDG AARYAAAYET SANDLQVLHQ CGADAGSGPT
301: TTTEDDVFAG TTWSDLLATA TATGPDGDDS SSSMIGLQME DFGFGLGDLA DDGLWSLDDL FCFQQLC
101: LRPDVRRGNI TVEEQLLILE LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHARRLR CDANSAQFRH LWMPRLLERA QDLQQPAAAT VPAAVAQAAP
201: ATTTTSAPPP ACYYNYYYDD HHHLAHQQGA LHQYYSEPAG QTAAAATALS PDDASSALRP PSSSLTADDG AARYAAAYET SANDLQVLHQ CGADAGSGPT
301: TTTEDDVFAG TTWSDLLATA TATGPDGDDS SSSMIGLQME DFGFGLGDLA DDGLWSLDDL FCFQQLC
001: MNISRTEFAN CKTLINHKEE VEEVEKKMEI EIRRGPWTVE EDMKLVSYIS LHGEGRWNSL SRSAGLNRTG KSCRLRWLNY LRPDIRRGDI SLQEQFIILE
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
101: LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKLLK CDVNSKQFKD TIKHLWMPRL IERIAATQSV QFTSNHYSPE NSSVATATSS TSSSEAVRSS
201: FYGGDQVEFG TLDHMTNGGY WFNGGDTFET LCSFDELNKW LIQ
Arabidopsis Description
MYB112MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q94CJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.