Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77249 | Sorghum | nucleus | 66.03 | 78.9 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 39.4 | 57.09 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 39.4 | 56.2 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 39.4 | 55.13 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 39.95 | 54.85 |
| Zm00001d035605_P001 | Maize | nucleus | 46.2 | 51.99 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 29.35 | 51.67 |
| GSMUA_Achr10P... | Banana | nucleus | 30.71 | 47.88 |
| Zm00001d030678_P001 | Maize | nucleus | 30.98 | 47.11 |
| GSMUA_Achr11P... | Banana | nucleus | 30.43 | 46.47 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 29.62 | 45.99 |
| Zm00001d041576_P001 | Maize | nucleus | 30.98 | 45.6 |
| PGSC0003DMT400040149 | Potato | nucleus | 26.9 | 45.41 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 29.62 | 45.23 |
| Zm00001d048623_P002 | Maize | nucleus | 27.99 | 45.18 |
| AT5G59780.3 | Thale cress | nucleus | 28.8 | 45.11 |
| Solyc11g073120.1.1 | Tomato | nucleus | 26.36 | 44.7 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 30.43 | 43.75 |
| Solyc06g005330.2.1 | Tomato | nucleus | 27.72 | 43.22 |
| CDX71075 | Canola | nucleus | 27.99 | 42.74 |
| CDY49581 | Canola | nucleus | 27.45 | 42.62 |
| Bra002533.1-P | Field mustard | nucleus | 27.45 | 42.62 |
| Bra006694.1-P | Field mustard | nucleus | 27.99 | 42.56 |
| CDX80230 | Canola | nucleus | 27.17 | 42.19 |
| CDX88722 | Canola | nucleus | 27.72 | 42.15 |
| Bra020289.1-P | Field mustard | nucleus | 26.9 | 41.95 |
| CDY70097 | Canola | nucleus | 26.9 | 41.95 |
| Bra018223.1-P | Field mustard | nucleus | 28.53 | 41.67 |
| KRH10298 | Soybean | nucleus | 28.8 | 41.57 |
| KRH23019 | Soybean | nucleus | 29.08 | 40.53 |
| AT3G46130.1 | Thale cress | nucleus | 28.26 | 40.31 |
| CDX86041 | Canola | nucleus | 28.53 | 37.77 |
| CDX86040 | Canola | nucleus | 28.53 | 37.77 |
| CDX99125 | Canola | nucleus | 28.53 | 37.77 |
| KRH29850 | Soybean | nucleus | 26.63 | 36.84 |
| KRH24842 | Soybean | nucleus | 26.36 | 36.47 |
| Zm00001d048383_P001 | Maize | nucleus | 20.65 | 32.76 |
| Zm00001d027623_P001 | Maize | nucleus | 20.92 | 30.92 |
| Zm00001d044107_P001 | Maize | nucleus | 21.74 | 30.3 |
| Zm00001d017243_P001 | Maize | nucleus | 21.74 | 28.47 |
| Zm00001d025823_P001 | Maize | nucleus | 21.47 | 28.42 |
| Zm00001d040594_P001 | Maize | nucleus | 21.74 | 26.4 |
| Zm00001d009066_P001 | Maize | nucleus | 22.28 | 25.79 |
| Zm00001d007191_P001 | Maize | nucleus | 23.64 | 25.07 |
| Zm00001d028930_P001 | Maize | nucleus | 22.28 | 24.4 |
| Zm00001d051117_P001 | Maize | nucleus | 17.66 | 23.3 |
| Zm00001d040019_P001 | Maize | nucleus | 22.55 | 22.93 |
| Zm00001d008528_P001 | Maize | nucleus | 22.55 | 22.93 |
| Zm00001d024726_P001 | Maize | nucleus | 22.01 | 22.82 |
| Zm00001d030644_P001 | Maize | nucleus | 21.74 | 22.79 |
| Zm00001d047579_P001 | Maize | nucleus | 21.47 | 22.64 |
| Zm00001d010933_P001 | Maize | nucleus | 22.28 | 22.34 |
| Zm00001d048647_P001 | Maize | nucleus | 20.92 | 21.88 |
| Zm00001d024725_P001 | Maize | nucleus | 22.55 | 20.44 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | UniProt:A0A1D6LHJ4 | ProteinID:AQK79343.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF591 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TMHMM:TMhelix | UniParc:UPI0008437CBB | EnsemblPlantsGene:Zm00001d035604 |
| EnsemblPlants:Zm00001d035604_P001 | EnsemblPlants:Zm00001d035604_T001 | SEG:seg | : | : | : |
Description
MYB-transcription factor 62Putative MYB DNA-binding domain superfamily protein
Coordinates
chr6:-:36325267..36326373
Molecular Weight (calculated)
40858.7 Da
IEP (calculated)
6.981
GRAVY (calculated)
-0.536
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLLCISRR NNKKDSDGDG EYGGEQIIIS TGGAAMRKGP WTDEEDEQLV RFVRLFGERR WDFLAKVSGL RGGGCVDRSA SMQLRMHEEG RSASIEQLAV
101: FLTVCFFFFL LIFVAYLRAA LVDTDGDVRA GLRRTGKSCR LRWVNYLHPG LRRGRITADE ERRIVELHAQ WGSRWSRIAR SLPGRTDNEI KNFWRTRTRK
201: KALEERRAAA AATSTAAESA SSVMTVSSSS ECRRPPVSSS SSSSSLRRDE ARRSGDETEE ASTPTAAPAT KHDEEPQPQP QECYDFPMDQ LWNEIAAADA
301: AAMSYLVVDA CWGGAAVGGH CYYYGAAAAS AASPPPPASP PWEYCGSDFS LWRIDDQEYY KKMLDSSS
101: FLTVCFFFFL LIFVAYLRAA LVDTDGDVRA GLRRTGKSCR LRWVNYLHPG LRRGRITADE ERRIVELHAQ WGSRWSRIAR SLPGRTDNEI KNFWRTRTRK
201: KALEERRAAA AATSTAAESA SSVMTVSSSS ECRRPPVSSS SSSSSLRRDE ARRSGDETEE ASTPTAAPAT KHDEEPQPQP QECYDFPMDQ LWNEIAAADA
301: AAMSYLVVDA CWGGAAVGGH CYYYGAAAAS AASPPPPASP PWEYCGSDFS LWRIDDQEYY KKMLDSSS
001: MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGMSL LLSSQSKQKP LQLFFLFFMI LNVYICKNEG LLRCGKSCRL RWINYLRPDL
101: KRGNFTSEEE ETIIKLHHNY GNKWSKIASQ LPGRTDNEIK NVWHTHLKKR LAQSSGTADE PASPCSSDSV SRGKDDKSSH VEDSLNRETN HRNELSTSMS
201: SGGSNQQDDP KIDELRFEYI EEAYSEFNDI IIQEVDKPDL LEIPFDSDPD IWSFLDTSNS FQQSTANENS SGSRATTEEE SDEDEVKKWF KHLESELGLE
301: EDDNQQQYKE EESSSSSLLK NYELMIH
101: KRGNFTSEEE ETIIKLHHNY GNKWSKIASQ LPGRTDNEIK NVWHTHLKKR LAQSSGTADE PASPCSSDSV SRGKDDKSSH VEDSLNRETN HRNELSTSMS
201: SGGSNQQDDP KIDELRFEYI EEAYSEFNDI IIQEVDKPDL LEIPFDSDPD IWSFLDTSNS FQQSTANENS SGSRATTEEE SDEDEVKKWF KHLESELGLE
301: EDDNQQQYKE EESSSSSLLK NYELMIH
Arabidopsis Description
ATMYB63myb domain protein 63 [Source:TAIR;Acc:AT1G79180]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.