Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49581 | Canola | nucleus | 98.31 | 98.31 |
| Bra002533.1-P | Field mustard | nucleus | 97.89 | 97.89 |
| AT5G59780.3 | Thale cress | nucleus | 89.03 | 89.79 |
| CDY70097 | Canola | nucleus | 88.19 | 88.56 |
| CDX71075 | Canola | nucleus | 89.87 | 88.38 |
| CDX88722 | Canola | nucleus | 89.03 | 87.19 |
| CDX86040 | Canola | nucleus | 75.95 | 64.75 |
| CDX86041 | Canola | nucleus | 75.95 | 64.75 |
| CDX99125 | Canola | nucleus | 75.95 | 64.75 |
| GSMUA_Achr2P16200_001 | Banana | nucleus | 49.37 | 57.07 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 59.92 | 55.47 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 48.52 | 55.02 |
| HORVU5Hr1G021750.2 | Barley | nucleus | 54.85 | 54.85 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 54.43 | 54.2 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 54.43 | 54.2 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 54.01 | 54.01 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 54.01 | 53.78 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 53.59 | 53.59 |
| GSMUA_Achr10P... | Banana | nucleus | 51.05 | 53.54 |
| TraesCS5A01G083100.1 | Wheat | nucleus | 53.16 | 53.16 |
| KRH10298 | Soybean | nucleus | 56.96 | 52.94 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.1 | 52.53 |
| GSMUA_Achr10P... | Banana | nucleus | 46.84 | 52.36 |
| PGSC0003DMT400040149 | Potato | nucleus | 48.1 | 52.29 |
| KXG29192 | Sorghum | nucleus | 50.21 | 52.19 |
| Os11t0700500-01 | Rice | nucleus | 51.9 | 51.9 |
| KRH23019 | Soybean | nucleus | 57.81 | 51.89 |
| Zm00001d048623_P002 | Maize | nucleus | 49.79 | 51.75 |
| KXG23736 | Sorghum | nucleus | 52.32 | 51.67 |
| GSMUA_Achr9P28370_001 | Banana | nucleus | 46.41 | 51.4 |
| GSMUA_Achr10P... | Banana | nucleus | 51.05 | 51.27 |
| Os12t0567300-00 | Rice | nucleus | 52.32 | 51.24 |
| Solyc06g005330.2.1 | Tomato | nucleus | 50.21 | 50.42 |
| Zm00001d030678_P001 | Maize | nucleus | 51.48 | 50.41 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 50.21 | 50.21 |
| GSMUA_Achr8P34340_001 | Banana | nucleus | 51.9 | 50.2 |
| GSMUA_Achr11P... | Banana | nucleus | 50.63 | 49.79 |
| Zm00001d041576_P001 | Maize | nucleus | 52.32 | 49.6 |
| KRH29850 | Soybean | nucleus | 55.27 | 49.25 |
| KRH24842 | Soybean | nucleus | 54.85 | 48.87 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 49.37 | 48.55 |
| GSMUA_Achr8P02640_001 | Banana | nucleus | 45.57 | 45.76 |
| CDY58599 | Canola | nucleus | 20.25 | 45.28 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 44.3 | 41.34 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 44.73 | 39.55 |
| HORVU1Hr1G008810.3 | Barley | nucleus | 42.62 | 39.15 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 41.77 | 38.67 |
| TraesCS1A01G042700.1 | Wheat | nucleus | 42.62 | 38.4 |
| TraesCS3A01G535100.1 | Wheat | nucleus | 41.77 | 38.08 |
| CDX85422 | Canola | nucleus | 28.69 | 37.16 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 41.35 | 37.12 |
| CDY00146 | Canola | nucleus | 24.89 | 35.54 |
| CDX78153 | Canola | nucleus | 36.71 | 35.51 |
| CDX86220 | Canola | nucleus | 28.69 | 35.23 |
| CDY37512 | Canola | nucleus | 29.54 | 34.83 |
| CDX91944 | Canola | nucleus | 29.96 | 34.3 |
| CDY49063 | Canola | nucleus | 29.96 | 34.3 |
| CDX73572 | Canola | nucleus | 35.44 | 34.29 |
| Os01t0975300-01 | Rice | vacuole | 30.38 | 34.29 |
| CDX67561 | Canola | nucleus | 34.18 | 33.75 |
| CDX74303 | Canola | nucleus | 29.54 | 33.65 |
| CDX95420 | Canola | nucleus | 32.91 | 33.62 |
| OQU77249 | Sorghum | nucleus | 43.04 | 33.12 |
| KXG29190 | Sorghum | nucleus | 29.54 | 33.02 |
| CDY13311 | Canola | nucleus | 33.76 | 32.79 |
| CDY20036 | Canola | nucleus | 31.65 | 32.33 |
| Zm00001d035605_P001 | Maize | nucleus | 43.46 | 31.5 |
| CDX86471 | Canola | nucleus | 30.8 | 31.47 |
| CDY44433 | Canola | nucleus | 30.8 | 31.47 |
| CDY27504 | Canola | nucleus | 35.87 | 31.25 |
| CDX80085 | Canola | nucleus | 25.74 | 30.65 |
| EES17592 | Sorghum | nucleus | 43.04 | 30.54 |
| CDX85285 | Canola | nucleus | 33.76 | 29.63 |
| CDX77436 | Canola | nucleus | 32.49 | 29.62 |
| CDY61190 | Canola | nucleus | 32.49 | 29.5 |
| CDX86354 | Canola | nucleus | 33.33 | 29.48 |
| CDY00083 | Canola | nucleus | 33.33 | 29.26 |
| CDY19978 | Canola | nucleus | 32.91 | 29.21 |
| CDY45895 | Canola | nucleus | 31.65 | 29.18 |
| CDY03859 | Canola | nucleus | 35.02 | 28.92 |
| CDY42115 | Canola | nucleus | 33.76 | 28.88 |
| CDY49231 | Canola | nucleus | 32.49 | 28.73 |
| CDY69488 | Canola | nucleus | 33.33 | 28.52 |
| CDX84981 | Canola | nucleus | 34.6 | 28.47 |
| CDY69953 | Canola | nucleus | 33.33 | 28.01 |
| CDX96033 | Canola | nucleus | 33.33 | 27.82 |
| CDX93006 | Canola | nucleus | 32.07 | 27.74 |
| CDY64694 | Canola | nucleus | 32.07 | 27.74 |
| CDY01906 | Canola | nucleus | 33.33 | 27.72 |
| CDX94829 | Canola | nucleus | 31.65 | 27.47 |
| CDY12705 | Canola | nucleus | 32.91 | 27.37 |
| Zm00001d035604_P001 | Maize | nucleus | 42.19 | 27.17 |
| CDY54094 | Canola | nucleus | 32.49 | 27.02 |
| CDY05611 | Canola | nucleus | 32.91 | 24.53 |
| CDY33891 | Canola | nucleus | 32.91 | 24.53 |
| CDY24688 | Canola | nucleus | 32.91 | 24.45 |
| CDY05270 | Canola | nucleus | 32.91 | 24.22 |
| CDX99864 | Canola | nucleus | 32.49 | 24.06 |
| CDY34949 | Canola | nucleus | 32.49 | 24.06 |
| CDY70282 | Canola | nucleus | 29.11 | 23.47 |
| CDY35782 | Canola | nucleus | 18.99 | 21.95 |
| CDX74100 | Canola | nucleus | 27.43 | 19.29 |
| CDY58600 | Canola | nucleus | 20.25 | 14.86 |
| CDX86221 | Canola | nucleus | 2.95 | 10.0 |
Protein Annotations
| EnsemblPlants:CDX80230 | EnsemblPlantsGene:GSBRNA2T00133193001 | Gene3D:1.10.10.60 | GO:A0A078CTP5 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF484 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX80230 | ProteinID:CDX80230.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EB6248 | MapMan:15.5.2.1 | : |
Description
BnaC09g35120D
Coordinates
chrLK031820:+:733894..735048
Molecular Weight (calculated)
27567.3 Da
IEP (calculated)
8.471
GRAVY (calculated)
-0.872
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNVQEEYRK GPWTEQEDIL LVNFVHAFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTHQE ERLVLELHAT WGNRWSKIAK KLPGRTDNEI
101: KNYWRTHMRK QAQEKKRPMS PTSSSSNCCS SSMTQDTVGS NGKMNQECDD GNYSMDDIWR EIDQSGANII KPVKDIYYSE QSCHFNFHPL PLASPTWESS
201: LESTWNMDAY ESKMSSFAID QFPLSFEHGR SSWSSLV
101: KNYWRTHMRK QAQEKKRPMS PTSSSSNCCS SSMTQDTVGS NGKMNQECDD GNYSMDDIWR EIDQSGANII KPVKDIYYSE QSCHFNFHPL PLASPTWESS
201: LESTWNMDAY ESKMSSFAID QFPLSFEHGR SSWSSLV
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.