Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G142300.1 | Wheat | nucleus | 80.59 | 80.25 |
| TraesCS4A01G173300.2 | Wheat | nucleus | 80.59 | 80.25 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 79.75 | 79.41 |
| KXG29192 | Sorghum | nucleus | 75.95 | 78.95 |
| Zm00001d048623_P002 | Maize | nucleus | 75.11 | 78.07 |
| Os12t0567300-00 | Rice | nucleus | 70.46 | 69.01 |
| AT5G59780.3 | Thale cress | nucleus | 54.85 | 55.32 |
| Bra006694.1-P | Field mustard | nucleus | 55.27 | 54.13 |
| CDX88722 | Canola | nucleus | 54.43 | 53.31 |
| PGSC0003DMT400040149 | Potato | nucleus | 48.95 | 53.21 |
| Solyc11g073120.1.1 | Tomato | nucleus | 48.52 | 53.0 |
| CDX71075 | Canola | nucleus | 53.59 | 52.7 |
| Bra020289.1-P | Field mustard | nucleus | 52.32 | 52.54 |
| CDY70097 | Canola | nucleus | 52.32 | 52.54 |
| CDY49581 | Canola | nucleus | 52.32 | 52.32 |
| Bra002533.1-P | Field mustard | nucleus | 51.9 | 51.9 |
| CDX80230 | Canola | nucleus | 51.9 | 51.9 |
| Solyc06g005330.2.1 | Tomato | nucleus | 50.21 | 50.42 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 53.59 | 49.61 |
| Bra018223.1-P | Field mustard | nucleus | 51.48 | 48.41 |
| AT3G46130.1 | Thale cress | nucleus | 49.79 | 45.74 |
| KRH10298 | Soybean | nucleus | 48.52 | 45.1 |
| KRH29850 | Soybean | nucleus | 50.21 | 44.74 |
| CDX86040 | Canola | nucleus | 51.9 | 44.24 |
| KRH23019 | Soybean | nucleus | 48.95 | 43.94 |
| CDX99125 | Canola | nucleus | 51.48 | 43.88 |
| CDX86041 | Canola | nucleus | 51.48 | 43.88 |
| KRH24842 | Soybean | nucleus | 48.95 | 43.61 |
| Os01t0975300-01 | Rice | vacuole | 31.22 | 35.24 |
| Os03t0142600-00 | Rice | nucleus | 30.38 | 29.15 |
| Os01t0637800-00 | Rice | mitochondrion, nucleus, plastid | 33.33 | 28.42 |
| Os04t0508500-01 | Rice | nucleus | 33.33 | 28.11 |
| Os01t0298400-01 | Rice | extracellular, nucleus | 34.6 | 27.99 |
| Os02t0618400-02 | Rice | nucleus | 33.33 | 27.34 |
| Os07t0688200-01 | Rice | nucleus | 32.91 | 26.0 |
| Os11t0684000-01 | Rice | nucleus | 29.11 | 24.21 |
| Os03t0315400-01 | Rice | nucleus | 32.91 | 23.71 |
| Os01t0128000-01 | Rice | nucleus | 32.49 | 22.0 |
| Os05t0132700-01 | Rice | nucleus | 11.81 | 13.02 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:4351184 | ProteinID:AAX95362.1 | ProteinID:ABA95393.2 | ProteinID:ABA95395.2 |
| EMBL:AK111626 | ProteinID:BAF28880.1 | ProteinID:BAT15361.1 | EMBL:DQ075258 | EMBL:DQ075259 | EMBL:DQ075260 |
| ProteinID:EAZ19289.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | EnsemblPlantsGene:Os11g0700500 | EnsemblPlants:Os11t0700500-01 | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF698 | UniProt:Q53NK6 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI00005092FB | RefSeq:XP_015617959.1 | SEG:seg | : | : | : |
Description
MYBAS1Similar to Snapdragon myb protein 305 homolog. (Os11t0700500-01)
Coordinates
chr11:-:28703901..28705306
Molecular Weight (calculated)
27227.6 Da
IEP (calculated)
8.671
GRAVY (calculated)
-0.665
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTVREEMRK GPWTEQEDLQ LVCTVRLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKHGRMSPKE EHLIIELHAR WGNRWSRIAR RLPGRTDNEI
101: KNYWRTHMRK KAQERRGDMS PSSSSSSLVY QSCLLDTVPI ISMDGGDIHD DRSCMARVLK STQSVMDGYT MDQIWKEIEA PGAPSLLGID EGKDKACSNL
201: PCPLLTSTMS DYSCPEVFWK IDNEETRMLA TQSGYGK
101: KNYWRTHMRK KAQERRGDMS PSSSSSSLVY QSCLLDTVPI ISMDGGDIHD DRSCMARVLK STQSVMDGYT MDQIWKEIEA PGAPSLLGID EGKDKACSNL
201: PCPLLTSTMS DYSCPEVFWK IDNEETRMLA TQSGYGK
001: MKLVQEEYRK GPWTEQEDIL LVNFVHLFGD RRWDFVAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVLELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
101: KNYWRTHMRK KAQEKKRPMS PTSSSSNCCS SSMTTTTSQD TGGSNGKMNQ ECEDGYYSMD DIWREIDQSG ANVIKPVKDN YYSEQSCYLN FPPLASPTWE
201: SSLESIWNMD ADESKMSSFA IDQFPLSFEH GSGRL
Arabidopsis Description
MYB59Transcription factor MYB59 [Source:UniProtKB/Swiss-Prot;Acc:Q4JL84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.