Factsheet for Os07t0688200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0315400-01	Rice	nucleus	56.33	51.37
TraesCS2B01G112600.1	Wheat	nucleus	51.67	46.69
TraesCS2D01G096000.1	Wheat	nucleus	51.0	46.65
TraesCS2A01G097200.1	Wheat	nucleus	50.67	46.63
Os11t0684000-01	Rice	nucleus	43.67	45.96
Os01t0298400-01	Rice	extracellular, nucleus	42.67	43.69
KXG36991	Sorghum	nucleus	48.0	42.11
HORVU2Hr1G016380.1	Barley	nucleus	50.33	41.6
Zm00001d007191_P001	Maize	nucleus	46.0	39.77
Os12t0567300-00	Rice	nucleus	27.33	33.88
Os01t0128000-01	Rice	nucleus	39.33	33.71
Os05t0132700-01	Rice	nucleus	24.0	33.49
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	30.67	33.09
Os11t0700500-01	Rice	nucleus	26.0	32.91
Os02t0618400-02	Rice	nucleus	29.0	30.1
Os03t0142600-00	Rice	nucleus	23.33	28.34
Os04t0508500-01	Rice	nucleus	25.67	27.4
Os01t0975300-01	Rice	vacuole	18.33	26.19

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4344354	EMBL:AK103455	ProteinID:BAF22614.1	ProteinID:BAT03312.1
GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	EMBL:HQ858821	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
EnsemblPlantsGene:Os07g0688200	EnsemblPlants:Os07t0688200-01	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF908
UniProt:Q0D3F9	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0000E12C8F	RefSeq:XP_015645266.1
SEG:seg	:	:	:	:	:

Description

R2R3-MYBSimilar to Typical P-type R2R3 Myb protein (Fragment). (Os07t0688200-01)

Coordinates

chr7:+:29242089..29243584

Molecular Weight (calculated)

33704.8 Da

IEP (calculated)

5.725

GRAVY (calculated)

-0.502

Length

300 amino acids

Sequence
(BLAST)

001: MMMAREVSSE EEAGGGDELR RGPWTVEEDL LLVNYIAAHG EGRWNALARC AGLKRTGKSC RLRWLNYLRP DVRRGNMTAE EQLLILELHG RWGNRWSKIA
101: QHLPGRTDNE IKNYWRTRVQ KHAKHLNCDV NSQQFKDLMR YLWMPRLLER IHRSSQSQSH DADDADLSVS AATSCITSDL VVDAHHPPLA MADSNDSAAM
201: WQQHQAPQMS VAGAPPPTTT MAQHVVLPTA AASCHQMQDQ FVCARAAETT TCCWSESESL PGLAGLYYDD AAAALPEFDV ETMAMWGPED DPWYTQMLGL

Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)

001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF

Arabidopsis Description

AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.