Factsheet for Os03t0315400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G181100.1	Wheat	nucleus	78.42	80.88
TraesCS4A01G124900.1	Wheat	nucleus	77.51	79.94
TraesCS4B01G179500.1	Wheat	nucleus	77.2	79.87
KXG39500	Sorghum	nucleus	74.77	73.21
Zm00001d028930_P001	Maize	nucleus	72.95	71.43
Zm00001d047579_P001	Maize	nucleus	72.34	68.19
HORVU4Hr1G052490.5	Barley	nucleus, plastid	74.47	66.4
Os07t0688200-01	Rice	nucleus	51.37	56.33
GSMUA_Achr1P24960_001	Banana	nucleus	45.9	55.93
Os01t0298400-01	Rice	extracellular, nucleus	44.98	50.51
Os11t0684000-01	Rice	nucleus	41.34	47.72
Os05t0132700-01	Rice	nucleus	27.05	41.4
Os01t0128000-01	Rice	nucleus	37.99	35.71
Os01t0637800-00	Rice	mitochondrion, nucleus, plastid	29.79	35.25
Os12t0567300-00	Rice	nucleus	24.62	33.47
Os11t0700500-01	Rice	nucleus	23.71	32.91
Os03t0142600-00	Rice	nucleus	23.4	31.17
Os02t0618400-02	Rice	nucleus	26.75	30.45
Os04t0508500-01	Rice	nucleus	25.53	29.89
Os01t0975300-01	Rice	vacuole	17.63	27.62

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:4332651	ProteinID:ABF95617.1	EMBL:AK120551	ProteinID:BAF11851.1
ProteinID:BAS83901.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009628	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	GO:GO:0045893	GO:GO:1901002	GO:GO:1902584	InterPro:Homeobox-like_sf
InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os03g0315400	EnsemblPlants:Os03t0315400-01	PFAM:PF00249	PFscan:PS51294
PANTHER:PTHR10641	PANTHER:PTHR10641:SF743	UniProt:Q10MB4	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI0000DB49A7	RefSeq:XP_015628446.1	SEG:seg	:	:	:

Description

OsMYB2, MYB2Similar to Typical P-type R2R3 Myb protein (Fragment). (Os03t0315400-01)

Coordinates

chr3:-:11326096..11328222

Molecular Weight (calculated)

36044.7 Da

IEP (calculated)

4.587

GRAVY (calculated)

-0.613

Length

329 amino acids

Sequence
(BLAST)

001: MDMAHERDAS SEEEVMGGDL RRGPWTVEED LLLVNYIAAH GEGRWNSLAR SAGLKRTGKS CRLRWLNYLR PDLRRGNITP QEQLLILELH SRWGNRWSKI
101: AQHLPGRTDN EIKNYWRTRV QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAAAAGQQ QQQEGGTDTP PLSWQHGGSD GLYESPELPA PDASCWPAEY
201: CAAAGGAQSG GTPAPELSST TAGSSSLSTD SGAGAQPSWP TQADGAEWFT TACDASSATG GVAMRDTELE LAQPPCQGGQ TWTTSESSLP GLTFPDLAVA
301: DFEIGGFDVD SFWTSMEDDQ LWCPTQAAV

Best Arabidopsis Sequence Match ( AT5G49620.1 )
(BLAST)

001: MGDKGRSLKI NKNMEEFTKV EEEMDVRRGP WTVEEDLELI NYIASHGEGR WNSLARCAEL KRTGKSCRLR WLNYLRPDVR RGNITLEEQL LILELHTRWG
101: NRWSKIAQYL PGRTDNEIKN YWRTRVQKHA KQLKCDVNSQ QFKDTMKYLW MPRLVERIQA ASIGSVSMSS CVTTSSDQFV INNNNTNNVD NLALMSNPNG
201: YITPDNSSVA VSPVSDLTEC QVSSEVWKIG QDENLVDPKM TSPNYMDNSS GLLNGDFTKM QDQSDLNWFE NINGMVPNYS DSFWNIGNDE DFWLLQQHQQ
301: VHDNGSF

Arabidopsis Description

AtMYB78myb domain protein 78 [Source:TAIR;Acc:AT5G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.