Factsheet for Bra018223.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86041	Canola	nucleus	100.0	90.65
CDX99125	Canola	nucleus	100.0	90.65
CDX86040	Canola	nucleus	98.41	89.21
AT3G46130.1	Thale cress	nucleus	87.7	85.66
Bra006694.1-P	Field mustard	nucleus	74.21	77.27
Bra002533.1-P	Field mustard	nucleus	72.62	77.22
Bra020289.1-P	Field mustard	nucleus	71.83	76.69
GSMUA_Achr2P16200_001	Banana	nucleus	47.62	58.54
Solyc11g073120.1.1	Tomato	nucleus	49.6	57.6
VIT_06s0004g04140.t01	Wine grape	nucleus	58.33	57.42
PGSC0003DMT400040149	Potato	nucleus	49.6	57.34
KRH10298	Soybean	nucleus	57.94	57.25
HORVU5Hr1G021750.2	Barley	nucleus	53.57	56.96
TraesCS5D01G095600.1	Wheat	nucleus	53.17	56.54
GSMUA_Achr6P15370_001	Banana	nucleus	46.83	56.46
KRH23019	Soybean	nucleus	59.13	56.44
GSMUA_Achr10P...	Banana	nucleus	50.4	56.19
TraesCS5B01G089200.1	Wheat	nucleus	52.78	56.12
TraesCS5A01G083100.1	Wheat	nucleus	52.78	56.12
GSMUA_Achr10P...	Banana	nucleus	46.03	54.72
Solyc06g005330.2.1	Tomato	nucleus	51.19	54.66
TraesCS4B01G143700.1	Wheat	nucleus	51.19	54.2
TraesCS4D01G142300.1	Wheat	nucleus	51.19	54.2
KXG29192	Sorghum	nucleus	48.81	53.95
TraesCS4A01G173300.2	Wheat	nucleus	50.79	53.78
GSMUA_Achr9P28370_001	Banana	nucleus	45.63	53.74
KXG23736	Sorghum	nucleus	50.79	53.33
KRH29850	Soybean	nucleus	55.95	53.01
GSMUA_Achr10P...	Banana	nucleus	49.6	52.97
KRH24842	Soybean	nucleus	55.56	52.63
Zm00001d048623_P002	Maize	nucleus	47.62	52.63
Zm00001d030678_P001	Maize	nucleus	50.4	52.48
Os12t0567300-00	Rice	nucleus	49.6	51.65
Os11t0700500-01	Rice	nucleus	48.41	51.48
GSMUA_Achr11P...	Banana	nucleus	49.21	51.45
Zm00001d041576_P001	Maize	nucleus	50.4	50.8
GSMUA_Achr5P28350_001	Banana	nucleus	47.62	50.63
GSMUA_Achr7P18200_001	Banana	nucleus	48.02	50.21
GSMUA_Achr8P34340_001	Banana	nucleus	48.41	49.8
GSMUA_Achr8P02640_001	Banana	nucleus	46.03	49.15
TraesCS1D01G043300.1	Wheat	nucleus	44.05	43.7
TraesCS1B01G055200.1	Wheat	nucleus	44.44	41.79
TraesCS1A01G042700.1	Wheat	nucleus	42.86	41.06
TraesCS3D01G540600.1	Wheat	nucleus	41.27	40.62
HORVU1Hr1G008810.3	Barley	nucleus	41.27	40.31
TraesCS3A01G535100.1	Wheat	nucleus	41.27	40.0
TraesCS3B01G612200.2	Wheat	nucleus	41.67	39.77
Bra006977.1-P	Field mustard	nucleus	36.51	37.55
KXG29190	Sorghum	nucleus	31.35	37.26
Bra028550.1-P	Field mustard	nucleus	35.32	37.08
Bra001005.1-P	Field mustard	nucleus	30.16	36.54
Bra039108.1-P	Field mustard	nucleus	28.97	35.61
Os01t0975300-01	Rice	vacuole	28.97	34.76
OQU77249	Sorghum	nucleus	42.06	34.42
Bra039067.1-P	Field mustard	nucleus	30.16	32.76
Bra025300.1-P	Field mustard	nucleus	29.76	32.33
Zm00001d035605_P001	Maize	nucleus	41.67	32.11
EES17592	Sorghum	nucleus	42.06	31.74
Bra004473.1-P	Field mustard	nucleus	33.73	30.91
Bra021389.1-P	Field mustard	nucleus	33.33	30.88
Bra012482.1-P	Field mustard	nucleus	33.73	29.93
Bra036202.1-P	Field mustard	nucleus	31.35	29.59
Bra020744.1-P	Field mustard	nucleus	30.16	29.57
Bra004297.1-P	Field mustard	nucleus	32.94	29.23
Bra015029.1-P	Field mustard	nucleus	31.35	29.15
Bra025410.1-P	Field mustard	nucleus	30.95	29.1
Bra004041.1-P	Field mustard	nucleus	32.54	29.08
Zm00001d035604_P001	Maize	nucleus	41.67	28.53
Bra001941.1-P	Field mustard	nucleus	30.95	28.47
Bra028369.1-P	Field mustard	nucleus	30.56	28.1
Bra033948.1-P	Field mustard	nucleus	31.75	28.07
Bra024760.1-P	Field mustard	nucleus	29.37	27.82
Bra001202.1-P	Field mustard	nucleus	30.56	25.33
Bra029582.1-P	Field mustard	nucleus	31.35	24.53
Bra020624.1-P	Field mustard	nucleus	30.95	24.53
Bra010021.1-P	Field mustard	nucleus	31.35	24.46
Bra010022.1-P	Field mustard	nucleus	31.35	24.46
Bra040274.1-P	Field mustard	nucleus	30.95	24.38

Protein Annotations

EnsemblPlants:Bra018223.1	EnsemblPlants:Bra018223.1-P	EnsemblPlantsGene:Bra018223	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF484	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000253F55C	UniProt:M4DNY5	MapMan:15.5.2.1	:	:

Description

AT3G46130 (E=2e-119) MYB111, ATMYB48, PFG3, ATMYB48-3 | MYB111 (MYB DOMAIN PROTEIN 111); DNA binding / transcription factor

Coordinates

chrA06:-:11228896..11229824

Molecular Weight (calculated)

29452.6 Da

IEP (calculated)

8.778

GRAVY (calculated)

-0.949

Length

252 amino acids

Sequence
(BLAST)

001: MNMMQEENRK GPWTEQEDII LVNFVHLFGD RRWDFIAKVS GLNRTGKSCR LRWVNYLHPG LKRGKMTPQE ERLVTELHAK WGNRWSKIAR KLPGRTDNEI
101: KNYWRTHMRK KAQEKKRHVS PSSSCSNCCS SSMTTTNTQD VSFESRMSSG KVSFYDTGGN REMNQEETKD GYSMDDIWKE IDHSAVNIIQ PVKDIYLEQS
201: YCLSYPNMAS PTWESSLDSI WKMEEDKSKM SSFGNDQFPF CFQHSRSPWS SG

Best Arabidopsis Sequence Match ( AT3G46130.1 )
(BLAST)

001: MKMMQEEGNR KGPWTEQEDI LLVNFVHLFG DRRWDFIAKV SGLNRTGKSC RLRWVNYLHP GLKRGKMTPQ EERLVLELHA KWGNRWSKIA RKLPGRTDNE
101: IKNYWRTHMR KKAQEKKRPV SPTSSFSNCS SSSVTTTTTN TQDTSCHSRK SSGEVSFYDT GGSRSTREMN QENEDVYSLD DIWREIDHSA VNIIKPVKDI
201: YSEQSHCLSY PNLASPSWES SLDSIWNMDA DKSKISSYFA NDQFPFCFQH SRSPWSSG

Arabidopsis Description

ATMYB48myb domain protein 48 [Source:TAIR;Acc:AT3G46130]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.