Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G535100.1 | Wheat | nucleus | 95.7 | 94.23 |
| TraesCS3B01G612200.2 | Wheat | nucleus | 93.75 | 90.91 |
| TraesCS1D01G043300.1 | Wheat | nucleus | 49.22 | 49.61 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 40.23 | 49.28 |
| PGSC0003DMT400040149 | Potato | nucleus | 39.06 | 45.87 |
| TraesCS5D01G095600.1 | Wheat | nucleus | 42.19 | 45.57 |
| Solyc11g073120.1.1 | Tomato | nucleus | 38.28 | 45.16 |
| GSMUA_Achr10P... | Banana | nucleus | 41.41 | 44.92 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 41.41 | 43.98 |
| AT5G59780.3 | Thale cress | nucleus | 40.23 | 43.83 |
| TraesCS4D01G142300.1 | Wheat | nucleus | 39.84 | 42.86 |
| GSMUA_Achr11P... | Banana | nucleus | 40.23 | 42.74 |
| Bra020289.1-P | Field mustard | nucleus | 39.06 | 42.37 |
| CDY70097 | Canola | nucleus | 39.06 | 42.37 |
| Solyc06g005330.2.1 | Tomato | nucleus | 39.06 | 42.37 |
| Bra002533.1-P | Field mustard | nucleus | 39.06 | 42.19 |
| CDY49581 | Canola | nucleus | 39.06 | 42.19 |
| CDX71075 | Canola | nucleus | 39.45 | 41.91 |
| CDX80230 | Canola | nucleus | 38.67 | 41.77 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 41.41 | 41.41 |
| Bra006694.1-P | Field mustard | nucleus | 39.06 | 41.32 |
| Bra018223.1-P | Field mustard | nucleus | 40.62 | 41.27 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 37.89 | 40.93 |
| CDX88722 | Canola | nucleus | 38.67 | 40.91 |
| KRH10298 | Soybean | nucleus | 40.23 | 40.39 |
| AT3G46130.1 | Thale cress | nucleus | 40.23 | 39.92 |
| KRH23019 | Soybean | nucleus | 40.62 | 39.39 |
| KRH29850 | Soybean | nucleus | 39.45 | 37.97 |
| Os01t0975300-01 | Rice | vacuole | 30.86 | 37.62 |
| CDX86040 | Canola | nucleus | 40.62 | 37.41 |
| CDX86041 | Canola | nucleus | 40.62 | 37.41 |
| CDX99125 | Canola | nucleus | 40.62 | 37.41 |
| KRH24842 | Soybean | nucleus | 38.67 | 37.22 |
| TraesCS1D01G415000.1 | Wheat | nucleus | 29.3 | 32.89 |
| TraesCS3D01G223700.1 | Wheat | nucleus | 26.17 | 31.31 |
| TraesCS2D01G361600.1 | Wheat | nucleus | 29.69 | 29.57 |
| TraesCS4D01G339100.1 | Wheat | nucleus | 28.52 | 29.55 |
| TraesCS6D01G207300.1 | Wheat | nucleus | 30.86 | 28.73 |
| TraesCS3D01G413700.1 | Wheat | nucleus | 31.64 | 27.65 |
| TraesCS5D01G099100.1 | Wheat | nucleus | 29.3 | 26.98 |
| TraesCS4D01G142900.1 | Wheat | nucleus | 30.08 | 26.28 |
| TraesCS4D01G181100.1 | Wheat | nucleus | 30.86 | 24.76 |
| TraesCS1D01G078600.1 | Wheat | nucleus | 30.86 | 24.46 |
| TraesCS3D01G014800.1 | Wheat | nucleus | 25.0 | 23.02 |
| TraesCS2D01G096000.1 | Wheat | nucleus | 28.52 | 22.26 |
| TraesCS3D01G036200.1 | Wheat | nucleus | 28.52 | 21.22 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G540600.1 | EnsemblPlantsGene:TraesCS3D01G540600 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF591 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:611918066..611919440
Molecular Weight (calculated)
28612.5 Da
IEP (calculated)
9.100
GRAVY (calculated)
-0.745
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMKQTKKTS APSPGKQEEA VAPGGFRKGP WTEQEDMKLA WFVRLFGERR WDFLAKVSGL NRTGKSCRLR WVNYLHPDLK RGRMSPDEER LVVDLHARWG
101: NRWSRIAKAM PGRTDNEIKN YWRTHTRKLH KDTRTASAAS ASTSMSAASP GTTSSSSSST IDNDNNSHHG HRDQETAASQ EQADHQLLYT AGIGMDSHLL
201: WNDAIMDSYA WGAAVPSMIV PPPSSPVWDY CCSDSLWGIG DDEVEYKKML AVAGAS
101: NRWSRIAKAM PGRTDNEIKN YWRTHTRKLH KDTRTASAAS ASTSMSAASP GTTSSSSSST IDNDNNSHHG HRDQETAASQ EQADHQLLYT AGIGMDSHLL
201: WNDAIMDSYA WGAAVPSMIV PPPSSPVWDY CCSDSLWGIG DDEVEYKKML AVAGAS
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.