Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G535100.1 | Wheat | nucleus | 95.08 | 96.54 |
| TraesCS3D01G540600.1 | Wheat | nucleus | 90.91 | 93.75 |
| GSMUA_Achr6P15370_001 | Banana | nucleus | 39.02 | 49.28 |
| TraesCS1B01G055200.1 | Wheat | nucleus | 49.62 | 48.88 |
| TraesCS5B01G089200.1 | Wheat | nucleus | 41.67 | 46.41 |
| PGSC0003DMT400040149 | Potato | nucleus | 38.26 | 46.33 |
| GSMUA_Achr10P... | Banana | nucleus | 40.91 | 45.76 |
| Solyc11g073120.1.1 | Tomato | nucleus | 37.5 | 45.62 |
| AT5G59780.3 | Thale cress | nucleus | 39.02 | 43.83 |
| TraesCS4B01G143700.1 | Wheat | nucleus | 39.39 | 43.7 |
| GSMUA_Achr7P18200_001 | Banana | nucleus | 39.77 | 43.57 |
| Solyc06g005330.2.1 | Tomato | nucleus | 38.64 | 43.22 |
| GSMUA_Achr11P... | Banana | nucleus | 39.39 | 43.15 |
| Bra020289.1-P | Field mustard | nucleus | 37.88 | 42.37 |
| CDY70097 | Canola | nucleus | 37.88 | 42.37 |
| CDX71075 | Canola | nucleus | 38.26 | 41.91 |
| VIT_06s0004g04140.t01 | Wine grape | nucleus | 40.53 | 41.8 |
| CDY49581 | Canola | nucleus | 37.5 | 41.77 |
| Bra002533.1-P | Field mustard | nucleus | 37.5 | 41.77 |
| Bra018223.1-P | Field mustard | nucleus | 39.77 | 41.67 |
| GSMUA_Achr5P28350_001 | Banana | nucleus | 37.12 | 41.35 |
| CDX80230 | Canola | nucleus | 37.12 | 41.35 |
| Bra006694.1-P | Field mustard | nucleus | 37.5 | 40.91 |
| CDX88722 | Canola | nucleus | 37.12 | 40.5 |
| KRH10298 | Soybean | nucleus | 39.02 | 40.39 |
| AT3G46130.1 | Thale cress | nucleus | 39.39 | 40.31 |
| KRH23019 | Soybean | nucleus | 39.39 | 39.39 |
| Os01t0975300-01 | Rice | vacuole | 30.68 | 38.57 |
| KRH29850 | Soybean | nucleus | 38.26 | 37.97 |
| CDX86040 | Canola | nucleus | 39.77 | 37.77 |
| CDX99125 | Canola | nucleus | 39.77 | 37.77 |
| CDX86041 | Canola | nucleus | 39.77 | 37.77 |
| KRH24842 | Soybean | nucleus | 37.5 | 37.22 |
| TraesCS3B01G258800.1 | Wheat | nucleus | 26.52 | 32.86 |
| TraesCS6B01G254200.1 | Wheat | nucleus | 31.06 | 29.93 |
| TraesCS2B01G381800.1 | Wheat | nucleus | 29.17 | 29.84 |
| TraesCS4B01G344000.1 | Wheat | nucleus | 27.65 | 29.67 |
| TraesCS1B01G436800.1 | Wheat | nucleus | 20.08 | 28.04 |
| TraesCS3B01G453300.1 | Wheat | nucleus | 31.44 | 27.04 |
| TraesCS5B01G093000.1 | Wheat | nucleus | 28.03 | 26.62 |
| TraesCS1B01G094500.1 | Wheat | nucleus | 30.68 | 24.85 |
| TraesCS4B01G179500.1 | Wheat | nucleus | 29.92 | 24.84 |
| TraesCS2B01G112600.1 | Wheat | nucleus | 29.92 | 23.8 |
| TraesCS3B01G039100.1 | Wheat | nucleus | 28.41 | 21.37 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G612200.2 | EnsemblPlantsGene:TraesCS3B01G612200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF591 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:829541507..829542481
Molecular Weight (calculated)
29194.9 Da
IEP (calculated)
8.476
GRAVY (calculated)
-0.746
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTKQASKAK AAPSPGKEEE AVAPGGFRKG PWTEQEDMKL AWFVRLFGER RWDFLAKVSG LNRTGKSCRL RWVNYLHPDL KRGRMSPEEE RLVVDLHARW
101: GNRWSRIAKA MPGRTDNEIK NYWRTHTRKL HKDTRAASAA SASTTTTTST SMSAASPATT SSSSSSSTND NDNHSHHGHG DQETAASQEQ ADHQLLYTSG
201: IGMDSHLLWN DALMDSYAWG AAAPSMIVPP PSSPVWDYCC SDSLWGIGDD EVEYKKMLAV AGAP
101: GNRWSRIAKA MPGRTDNEIK NYWRTHTRKL HKDTRAASAA SASTTTTTST SMSAASPATT SSSSSSSTND NDNHSHHGHG DQETAASQEQ ADHQLLYTSG
201: IGMDSHLLWN DALMDSYAWG AAAPSMIVPP PSSPVWDYCC SDSLWGIGDD EVEYKKMLAV AGAP
001: MSLWGGMGGG WGMVEEGWRK GPWTAEEDRL LIDYVQLHGE GRWNSVARLA GLKRNGKSCR LRWVNYLRPD LKRGQITPHE ETIILELHAK WGNRWSTIAR
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
101: SLPGRTDNEI KNYWRTHFKK KTKSPTNSAE KTKNRILKRQ QFQQQRQMEL QQEQQLLQFN QIDMKKIMSL LDDDNNNGDN TFSSSSSGES GALYVPHQIT
201: HSTTTSGCEP NSNGYYPVVP VTIPEANVNE DNAIWDGLWN LDFEGQGSFG GAACAPRKHY FQNMVIPFC
Arabidopsis Description
MYB305MYB305 [Source:UniProtKB/TrEMBL;Acc:A0A178VHM5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.